Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016431 |
| length | 1336 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | AMCG00016431 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 19866278 ~ 19869018 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint | biological_process |
| GO:0005680 | anaphase-promoting complex | cellular_component |
| id | description |
|---|---|
| K25228 | APC15, ANAPC15; anaphase-promoting complex subunit 15 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16709 | lncRNA | upstream | 301166 | 19564800 ~ 19565112 (+) | True | G13500 |
| TU16705 | lncRNA | upstream | 354112 | 19511913 ~ 19512166 (+) | True | G13496 |
| TU16704 | lncRNA | upstream | 395822 | 19470175 ~ 19470456 (+) | True | G13495 |
| TU16703 | lncRNA | upstream | 396180 | 19469635 ~ 19470098 (+) | True | G13494 |
| TU16702 | lncRNA | upstream | 397490 | 19468580 ~ 19468788 (+) | True | G13493 |
| TU16797 | lncRNA | downstream | 6082 | 19875100 ~ 19879716 (+) | False | AMCG00016429 |
| TU16825 | lncRNA | downstream | 145926 | 20014944 ~ 20018086 (+) | True | G13593 |
| TU16833 | lncRNA | downstream | 162475 | 20031493 ~ 20032916 (+) | True | G13599 |
| TU16913 | lncRNA | downstream | 350425 | 20219443 ~ 20256020 (+) | True | G13659 |
| TU16917 | lncRNA | downstream | 418057 | 20287075 ~ 20289834 (+) | True | G13662 |
| AMCG00016430 | mRNA | upstream | 51668 | 19811402 ~ 19814610 (+) | True | AMCG00016430 |
| AMCG00016432 | mRNA | upstream | 66464 | 19758327 ~ 19799814 (+) | True | AMCG00016432 |
| AMCG00016422 | mRNA | upstream | 421393 | 19438593 ~ 19444885 (+) | True | AMCG00016422 |
| AMCG00016417 | mRNA | upstream | 503808 | 19339826 ~ 19362470 (+) | True | AMCG00016417 |
| AMCG00016421 | mRNA | upstream | 540571 | 19324580 ~ 19325707 (+) | True | AMCG00016421 |
| AMCG00016429 | mRNA | downstream | 6038 | 19875056 ~ 19879725 (+) | True | AMCG00016429 |
| AMCG00016438 | mRNA | downstream | 16740 | 19885758 ~ 19898268 (+) | True | AMCG00016438 |
| AMCG00016439 | mRNA | downstream | 42822 | 19911840 ~ 19938673 (+) | True | AMCG00016439 |
| AMCG00016441 | mRNA | downstream | 129414 | 19998432 ~ 20005939 (+) | True | AMCG00016441 |
| AMCG00016451 | mRNA | downstream | 138979 | 20007997 ~ 20009859 (+) | True | AMCG00016451 |
| TU16114 | other | upstream | 2744346 | 17116793 ~ 17121932 (+) | True | G13012 |
| TU15937 | other | upstream | 3380275 | 16484355 ~ 16486003 (+) | True | AMCG00016329 |
| TU15942 | other | upstream | 3380275 | 16484355 ~ 16486003 (+) | False | AMCG00016329 |
| TU15938 | other | upstream | 3381130 | 16484355 ~ 16485148 (+) | False | AMCG00016329 |
| TU15538 | other | upstream | 5427672 | 14437771 ~ 14438606 (+) | True | G12587 |
| TU17415 | other | downstream | 4210999 | 24080017 ~ 24110182 (+) | False | G14057 |
| TU17581 | other | downstream | 4666000 | 24535018 ~ 24561807 (+) | False | AMCG00016537 |
| TU17758 | other | downstream | 5138944 | 25007962 ~ 25010687 (+) | True | G14326 |
| TU17806 | other | downstream | 5264180 | 25133198 ~ 25133879 (+) | True | G14361 |
| TU17809 | other | downstream | 5281465 | 25150483 ~ 25157461 (+) | False | AMCG00016566 |
