RNA id: AMCG00016505



Basic Information


Item Value
RNA id AMCG00016505
length 384
RNA type mRNA
GC content 0.58
exon number 4
gene id AMCG00016505
representative False

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23864581 ~ 23885258 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAATTGCGGGGCAGCACTGGCTGCCGAGACGAGGACGAAAGAGTGGGGGCTGTGAATGATTCGCCCGCATGTGTAGTGGAGACACCGACGCCAAGCCCTGAAGCACAGGTCAAGAAAGAGCCGATTTCTCATGCTGAGGATGCTGTGGGAGccaagaggaggaagaggagaaaggTCATGAAGTCTTCTACATTTATGGATGACGAAGGATGCATAGCCGAAGGGCCCGAAGGGAAGCTCCTGGGGCAGGCAGGTGGGGCGGCAGGTACCGCTGTAGTTGGAACAGCCCCAGGGGAACCCGACCGCTCCCTGGACCTGGCCTGGCGGACAGGACGGAGGAATGGGAAAAGCAGTTTGATCTCCAGCTTCCATGATTTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU17307 lncRNA downstream 20360 23841062 ~ 23844221 (-) False AMCG00016504
TU17281 lncRNA downstream 505767 23358371 ~ 23358814 (-) True G13957
TU17280 lncRNA downstream 506889 23357461 ~ 23357692 (-) True G13956
TU17278 lncRNA downstream 516869 23347440 ~ 23347712 (-) True G13954
TU17276 lncRNA downstream 517230 23347006 ~ 23347351 (-) True G13952
TU17356 lncRNA upstream 47751 23933009 ~ 23933843 (-) True G14012
TU17358 lncRNA upstream 48908 23934166 ~ 23934467 (-) True G14013
TU17360 lncRNA upstream 56060 23941318 ~ 23941538 (-) True G14015
TU17361 lncRNA upstream 56786 23942044 ~ 23943378 (-) True G14016
TU17453 lncRNA upstream 262141 24147399 ~ 24147677 (-) True G14092
AMCG00016504 mRNA downstream 1842 23841062 ~ 23862739 (-) True AMCG00016504
AMCG00016497 mRNA downstream 1779239 22077617 ~ 22085342 (-) True AMCG00016497
AMCG00016487 mRNA downstream 1843850 22017124 ~ 22020731 (-) True AMCG00016487
AMCG00016488 mRNA downstream 1912388 21949268 ~ 21952193 (-) True AMCG00016488
AMCG00016486 mRNA downstream 1942942 21910870 ~ 21921639 (-) True AMCG00016486
AMCG00016512 mRNA upstream 8165 23893423 ~ 23902805 (-) True AMCG00016512
AMCG00016510 mRNA upstream 31685 23916943 ~ 23925716 (-) True AMCG00016510
AMCG00016514 mRNA upstream 42633 23927891 ~ 23931580 (-) True AMCG00016514
AMCG00016513 mRNA upstream 49645 23934903 ~ 23937234 (-) True AMCG00016513
AMCG00016511 mRNA upstream 59936 23945194 ~ 23951329 (-) True AMCG00016511
TU17295 other downstream 164326 23699149 ~ 23700255 (-) True G13969
TU17287 other downstream 408770 23455092 ~ 23455811 (-) True G13962
TU16905 other downstream 3729034 20135197 ~ 20135547 (-) False AMCG00016453
TU16556 other downstream 4759200 19091239 ~ 19105381 (-) True G13367
TU16027 other downstream 7003402 16858541 ~ 16861179 (-) False G12945
TU17551 other upstream 425779 24311037 ~ 24316802 (-) False AMCG00016531
TU17553 other upstream 425779 24311037 ~ 24316802 (-) False AMCG00016531
TU17725 other upstream 995890 24881148 ~ 24882098 (-) True G14305
TU17766 other upstream 1126083 25011341 ~ 25011778 (-) False AMCG00016562
TU17768 other upstream 1127106 25012364 ~ 25015343 (-) False AMCG00016562

Expression Profile