Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016515 |
| length | 684 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 3 |
| gene id | AMCG00016515 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 24073722 ~ 24077286 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17335 | lncRNA | upstream | 128960 | 23943274 ~ 23944762 (+) | False | AMCG00016506 |
| TU17327 | lncRNA | upstream | 190776 | 23880907 ~ 23882946 (+) | True | AMCG00016502 |
| TU17326 | lncRNA | upstream | 190776 | 23880960 ~ 23882946 (+) | False | AMCG00016502 |
| TU17308 | lncRNA | upstream | 207922 | 23862215 ~ 23865800 (+) | True | G13979 |
| TU17414 | lncRNA | downstream | 2731 | 24080017 ~ 24103017 (+) | True | G14057 |
| TU17505 | lncRNA | downstream | 240514 | 24317800 ~ 24321319 (+) | True | G14132 |
| TU17511 | lncRNA | downstream | 259684 | 24336970 ~ 24338848 (+) | True | G14136 |
| TU17494 | lncRNA | downstream | 293040 | 24370326 ~ 24375827 (+) | True | G14127 |
| TU17497 | lncRNA | downstream | 293040 | 24370326 ~ 24375827 (+) | False | G14127 |
| AMCG00016516 | mRNA | upstream | 43766 | 24022414 ~ 24029956 (+) | True | AMCG00016516 |
| AMCG00016508 | mRNA | upstream | 100881 | 23959304 ~ 23972841 (+) | True | AMCG00016508 |
| AMCG00016506 | mRNA | upstream | 128698 | 23938051 ~ 23945024 (+) | True | AMCG00016506 |
| AMCG00016507 | mRNA | upstream | 139272 | 23925791 ~ 23934450 (+) | True | AMCG00016507 |
| AMCG00016509 | mRNA | upstream | 160289 | 23904004 ~ 23913433 (+) | True | AMCG00016509 |
| AMCG00016520 | mRNA | downstream | 12544 | 24089830 ~ 24101565 (+) | True | AMCG00016520 |
| AMCG00016519 | mRNA | downstream | 27619 | 24104905 ~ 24118373 (+) | True | AMCG00016519 |
| AMCG00016529 | mRNA | downstream | 247664 | 24324950 ~ 24336827 (+) | True | AMCG00016529 |
| AMCG00016537 | mRNA | downstream | 402420 | 24479706 ~ 24542799 (+) | True | AMCG00016537 |
| AMCG00016536 | mRNA | downstream | 491842 | 24569128 ~ 24580184 (+) | True | AMCG00016536 |
| TU16114 | other | upstream | 6951790 | 17116793 ~ 17121932 (+) | True | G13012 |
| TU15937 | other | upstream | 7587719 | 16484355 ~ 16486003 (+) | True | AMCG00016329 |
| TU15942 | other | upstream | 7587719 | 16484355 ~ 16486003 (+) | False | AMCG00016329 |
| TU15938 | other | upstream | 7588574 | 16484355 ~ 16485148 (+) | False | AMCG00016329 |
| TU15538 | other | upstream | 9635116 | 14437771 ~ 14438606 (+) | True | G12587 |
| TU17415 | other | downstream | 2731 | 24080017 ~ 24110182 (+) | False | G14057 |
| TU17581 | other | downstream | 457732 | 24535018 ~ 24561807 (+) | False | AMCG00016537 |
| TU17758 | other | downstream | 930676 | 25007962 ~ 25010687 (+) | True | G14326 |
| TU17806 | other | downstream | 1055912 | 25133198 ~ 25133879 (+) | True | G14361 |
| TU17809 | other | downstream | 1073197 | 25150483 ~ 25157461 (+) | False | AMCG00016566 |
