RNA id: AMCG00016596


Basic Information

Item Value
RNA id AMCG00016596
length 210
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00016596
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25439336 ~ 25449752 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGGGAGGTGAACAAAGACGGGAAGAGAAGAGCTTATTCCAGGGAAGGATCCATGATCTGTCCCTTGCTGGACTGTAGTGACACACCCACTCTACCGACACGGCTCTGTAAAGGCTCGGGGTTCCCGTCAGGCCGCACCCCACACTGTGACGTCACTGCCCTGCGAGTCGCGCACGTCGCCGGTAGCCACGCCTCCTCCGTGACGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17955 lncRNA downstream 25238 25413316 ~ 25414098 (-) False AMCG00016591
TU17952 lncRNA downstream 34235 25404895 ~ 25405101 (-) True G14472
TU17860 lncRNA downstream 316961 25122090 ~ 25122375 (-) True G14400
TU17763 lncRNA downstream 428081 25008156 ~ 25011255 (-) False AMCG00016562
TU17979 lncRNA upstream 67237 25516989 ~ 25520096 (-) True G14487
TU17984 lncRNA upstream 67237 25516989 ~ 25520096 (-) False G14487
TU17998 lncRNA upstream 93294 25543046 ~ 25545725 (-) True G14496
TU18009 lncRNA upstream 155028 25604780 ~ 25609059 (-) True G14507
TU18019 lncRNA upstream 222552 25672304 ~ 25675200 (-) True G14517
AMCG00016595 mRNA downstream 561 25433834 ~ 25438775 (-) True AMCG00016595
AMCG00016590 mRNA downstream 15677 25421283 ~ 25423659 (-) True AMCG00016590
AMCG00016591 mRNA downstream 18965 25413574 ~ 25420371 (-) True AMCG00016591
AMCG00016592 mRNA downstream 71757 25363398 ~ 25367579 (-) True AMCG00016592
AMCG00016589 mRNA downstream 78654 25357887 ~ 25360682 (-) True AMCG00016589
AMCG00016594 mRNA upstream 157 25449909 ~ 25483710 (-) True AMCG00016594
AMCG00016597 mRNA upstream 161811 25611563 ~ 25642333 (-) True AMCG00016597
AMCG00016600 mRNA upstream 226817 25676569 ~ 25703327 (-) True AMCG00016600
AMCG00016599 mRNA upstream 256329 25706081 ~ 25726547 (-) True AMCG00016599
AMCG00016601 mRNA upstream 374994 25824746 ~ 25825846 (-) True AMCG00016601
TU17858 other downstream 161858 25273664 ~ 25277478 (-) False AMCG00016579
TU17849 other downstream 355637 25080568 ~ 25083699 (-) True G14392
TU17768 other downstream 423993 25012364 ~ 25015343 (-) False AMCG00016562
TU17766 other downstream 427558 25011341 ~ 25011778 (-) False AMCG00016562
TU17725 other downstream 557238 24881148 ~ 24882098 (-) True G14305
TU18038 other upstream 303243 25752995 ~ 25754472 (-) True G14534
TU18183 other upstream 631751 26081503 ~ 26083167 (-) True G14637
TU18222 other upstream 706769 26156521 ~ 26159442 (-) True AMCG00016616
TU18225 other upstream 731992 26181744 ~ 26184778 (-) False G14676
TU18226 other upstream 731992 26181744 ~ 26184778 (-) True G14676

Expression Profile