Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016622 |
| length | 1327 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 10 |
| gene id | AMCG00016622 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 26199489 ~ 26212158 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046854 | phosphatidylinositol phosphorylation | biological_process |
| GO:0016307 | phosphatidylinositol phosphate kinase activity | molecular_function |
| id | description |
|---|---|
| K00920 | PIP4K2; 1-phosphatidylinositol-5-phosphate 4-kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18169 | lncRNA | upstream | 33507 | 26165630 ~ 26165982 (+) | True | G14623 |
| TU18082 | lncRNA | upstream | 263908 | 25933951 ~ 25935581 (+) | True | G14556 |
| TU18012 | lncRNA | upstream | 521140 | 25672259 ~ 25678349 (+) | True | G14510 |
| TU18004 | lncRNA | upstream | 587800 | 25604639 ~ 25611689 (+) | True | G14502 |
| TU17932 | lncRNA | upstream | 776463 | 25422443 ~ 25423026 (+) | True | G14455 |
| TU18247 | lncRNA | downstream | 1136 | 26213294 ~ 26215317 (+) | True | G14695 |
| TU18260 | lncRNA | downstream | 22168 | 26234326 ~ 26304342 (+) | True | G14703 |
| TU18261 | lncRNA | downstream | 27012 | 26239170 ~ 26241244 (+) | True | G14704 |
| TU18322 | lncRNA | downstream | 167893 | 26380051 ~ 26382420 (+) | True | G14755 |
| TU18340 | lncRNA | downstream | 185491 | 26397649 ~ 26397927 (+) | True | G14768 |
| AMCG00016618 | mRNA | upstream | 1116 | 26194421 ~ 26198373 (+) | True | AMCG00016618 |
| AMCG00016621 | mRNA | upstream | 14629 | 26181399 ~ 26184860 (+) | True | AMCG00016621 |
| AMCG00016610 | mRNA | upstream | 52513 | 26137776 ~ 26146976 (+) | True | AMCG00016610 |
| AMCG00016611 | mRNA | upstream | 64714 | 26122437 ~ 26134775 (+) | True | AMCG00016611 |
| AMCG00016613 | mRNA | upstream | 96776 | 26099372 ~ 26102713 (+) | True | AMCG00016613 |
| AMCG00016620 | mRNA | downstream | 20956 | 26233114 ~ 26237577 (+) | True | AMCG00016620 |
| AMCG00016619 | mRNA | downstream | 49574 | 26261732 ~ 26264293 (+) | True | AMCG00016619 |
| AMCG00016625 | mRNA | downstream | 73644 | 26285802 ~ 26302514 (+) | True | AMCG00016625 |
| AMCG00016626 | mRNA | downstream | 143447 | 26355605 ~ 26371140 (+) | True | AMCG00016626 |
| AMCG00016631 | mRNA | downstream | 199327 | 26411485 ~ 26416977 (+) | True | AMCG00016631 |
| TU18062 | other | upstream | 249313 | 25940528 ~ 25950176 (+) | True | AMCG00016607 |
| TU18064 | other | upstream | 249313 | 25940528 ~ 25950176 (+) | False | AMCG00016607 |
| TU18026 | other | upstream | 458931 | 25725848 ~ 25740558 (+) | False | AMCG00016598 |
| TU17920 | other | upstream | 807649 | 25370296 ~ 25391840 (+) | False | AMCG00016584 |
| TU17811 | other | upstream | 1042028 | 25150483 ~ 25157461 (+) | True | AMCG00016566 |
| TU18257 | other | downstream | 73705 | 26285863 ~ 26289222 (+) | False | AMCG00016625 |
| TU18348 | other | downstream | 215181 | 26427339 ~ 26432356 (+) | True | AMCG00016633 |
| TU18353 | other | downstream | 216565 | 26428723 ~ 26429327 (+) | False | AMCG00016633 |
| TU18379 | other | downstream | 393368 | 26605526 ~ 26657425 (+) | False | AMCG00016635 |
| TU18699 | other | downstream | 1333836 | 27545994 ~ 27547609 (+) | False | AMCG00016683 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000004_07172745_07186598.mRNA | True | 2027 | mRNA | 0.44 | 10 | CI01000004 | 7172249 ~ 7186959 (-) |
