RNA id: AMCG00016663


Basic Information

Item Value
RNA id AMCG00016663
length 273
RNA type mRNA
GC content 0.61
exon number 3
gene id AMCG00016663
representative False

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26966297 ~ 26993948 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGCCCCGAGTTGTGGTGGGCGTCAGTTTTCAGGACGAGAGAGAAGGAAGTAGCGGCAGAACACGGGCGCTCCCGCGGGCGCATGTGGAtgagaaggggtgggggggtgcgtGTCCTCTCCCACTGGGCGTGTATTTGATGGAACTGCCACTGCATCTTGGCGTTCTGGAAGATGGCAGTGATTGGCCACAGAAGTGGTGTGCAATGGACCGGGTCTGGCTGAGAAACCCCTCCTGGGAGGGATCCCTGCTGCGGCCTCTCCACCACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18391 lncRNA upstream 275243 26715569 ~ 26715801 (+) True G14803
TU18390 lncRNA upstream 277915 26712231 ~ 26713129 (+) True G14802
TU18388 lncRNA upstream 285840 26704997 ~ 26705204 (+) True G14800
TU18377 lncRNA upstream 333726 26589606 ~ 26657318 (+) False G14791
TU18626 lncRNA downstream 269955 27262890 ~ 27274297 (+) True G14992
TU18644 lncRNA downstream 288489 27281424 ~ 27282569 (+) True G15005
TU18672 lncRNA downstream 376654 27369589 ~ 27370138 (+) True G15025
TU18707 lncRNA downstream 549553 27542488 ~ 27544996 (+) False AMCG00016683
TU18718 lncRNA downstream 606875 27599810 ~ 27604875 (+) False AMCG00016691
AMCG00016661 mRNA upstream 731 26977195 ~ 26990313 (+) True AMCG00016661
AMCG00016655 mRNA upstream 72276 26911968 ~ 26918768 (+) True AMCG00016655
AMCG00016654 mRNA upstream 93510 26893279 ~ 26897534 (+) True AMCG00016654
AMCG00016650 mRNA upstream 121863 26857718 ~ 26869181 (+) True AMCG00016650
AMCG00016647 mRNA upstream 290843 26683642 ~ 26700201 (+) True AMCG00016647
AMCG00016660 mRNA downstream 6332 26999267 ~ 27009741 (+) True AMCG00016660
AMCG00016668 mRNA downstream 365843 27358778 ~ 27364948 (+) True AMCG00016668
AMCG00016677 mRNA downstream 401023 27393958 ~ 27403922 (+) True AMCG00016677
AMCG00016680 mRNA downstream 412473 27405408 ~ 27405728 (+) True AMCG00016680
AMCG00016676 mRNA downstream 413796 27406731 ~ 27409921 (+) True AMCG00016676
TU18379 other upstream 333619 26605526 ~ 26657425 (+) False AMCG00016635
TU18348 other upstream 558688 26427339 ~ 26432356 (+) True AMCG00016633
TU18353 other upstream 561717 26428723 ~ 26429327 (+) False AMCG00016633
TU18257 other upstream 701822 26285863 ~ 26289222 (+) False AMCG00016625
TU18064 other upstream 1040868 25940528 ~ 25950176 (+) False AMCG00016607
TU18699 other downstream 553059 27545994 ~ 27547609 (+) False AMCG00016683
TU18716 other downstream 595544 27588479 ~ 27599592 (+) False AMCG00016691
TU18717 other downstream 595544 27588479 ~ 27598648 (+) False AMCG00016691
TU18724 other downstream 620170 27613105 ~ 27619919 (+) False AMCG00016690
TU18835 other downstream 836333 27829268 ~ 27831694 (+) True AMCG00016705

Expression Profile