Item | Value |
---|---|
RNA id | AMCG00016672 |
length | 1050 |
RNA type | mRNA |
GC content | 0.57 |
exon number | 3 |
gene id | AMCG00016672 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030122.1 |
NCBI id | CM030122.1 |
chromosome length | 54868152 |
location | 27299603 ~ 27313173 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU18640 | lncRNA | downstream | 34000 | 27263713 ~ 27265603 (-) | True | G15001 |
TU18637 | lncRNA | downstream | 54356 | 27243966 ~ 27245247 (-) | True | G14999 |
TU18574 | lncRNA | downstream | 295896 | 26995173 ~ 27003707 (-) | False | AMCG00016662 |
TU18569 | lncRNA | downstream | 316117 | 26979158 ~ 26983486 (-) | True | G14943 |
TU18490 | lncRNA | downstream | 557265 | 26741085 ~ 26742338 (-) | True | G14882 |
TU18737 | lncRNA | upstream | 81946 | 27395119 ~ 27398583 (-) | True | G15066 |
TU18742 | lncRNA | upstream | 99827 | 27413000 ~ 27413229 (-) | True | G15071 |
TU18744 | lncRNA | upstream | 102480 | 27415653 ~ 27415892 (-) | True | G15073 |
TU18745 | lncRNA | upstream | 103076 | 27416249 ~ 27416539 (-) | True | G15074 |
TU18746 | lncRNA | upstream | 111381 | 27424554 ~ 27424821 (-) | True | G15075 |
AMCG00016673 | mRNA | downstream | 8742 | 27286874 ~ 27290861 (-) | True | AMCG00016673 |
AMCG00016674 | mRNA | downstream | 13142 | 27286213 ~ 27286461 (-) | True | AMCG00016674 |
AMCG00016671 | mRNA | downstream | 27578 | 27265887 ~ 27272025 (-) | False | AMCG00016671 |
AMCG00016666 | mRNA | downstream | 51606 | 27247560 ~ 27247997 (-) | True | AMCG00016666 |
AMCG00016665 | mRNA | downstream | 79879 | 27217458 ~ 27219724 (-) | True | AMCG00016665 |
AMCG00016669 | mRNA | upstream | 24834 | 27338007 ~ 27339593 (-) | True | AMCG00016669 |
AMCG00016670 | mRNA | upstream | 57806 | 27370979 ~ 27375700 (-) | True | AMCG00016670 |
AMCG00016675 | mRNA | upstream | 62792 | 27375965 ~ 27381088 (-) | True | AMCG00016675 |
AMCG00016681 | mRNA | upstream | 116929 | 27430102 ~ 27433860 (-) | True | AMCG00016681 |
AMCG00016688 | mRNA | upstream | 196472 | 27509645 ~ 27516973 (-) | True | AMCG00016688 |
TU18636 | other | downstream | 20269 | 27268820 ~ 27279334 (-) | True | AMCG00016671 |
TU18445 | other | downstream | 727962 | 26568669 ~ 26571641 (-) | True | G14843 |
TU18448 | other | downstream | 727962 | 26568669 ~ 26571641 (-) | False | G14843 |
TU18407 | other | downstream | 779206 | 26427339 ~ 26520397 (-) | True | G14816 |
TU18405 | other | downstream | 781324 | 26427339 ~ 26518279 (-) | False | G14816 |
TU18673 | other | upstream | 56417 | 27369590 ~ 27370139 (-) | True | G15026 |
TU18738 | other | upstream | 88503 | 27401676 ~ 27403922 (-) | True | G15067 |
TU18749 | other | upstream | 111720 | 27424893 ~ 27428651 (-) | True | G15076 |
TU19143 | other | upstream | 1468299 | 28781472 ~ 28785507 (-) | True | AMCG00016732 |
TU19522 | other | upstream | 2888286 | 30201459 ~ 30202351 (-) | True | G15706 |