Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016697 |
| length | 1056 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 2 |
| gene id | AMCG00016697 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 27822673 ~ 27823994 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18827 | lncRNA | upstream | 23558 | 27797549 ~ 27799115 (+) | False | AMCG00016699 |
| TU18718 | lncRNA | upstream | 217798 | 27599810 ~ 27604875 (+) | False | AMCG00016691 |
| TU18707 | lncRNA | upstream | 277677 | 27542488 ~ 27544996 (+) | False | AMCG00016683 |
| TU18672 | lncRNA | upstream | 452535 | 27369589 ~ 27370138 (+) | True | G15025 |
| TU18644 | lncRNA | upstream | 540104 | 27281424 ~ 27282569 (+) | True | G15005 |
| TU18859 | lncRNA | downstream | 12519 | 27836513 ~ 27839103 (+) | True | AMCG00016706 |
| TU18885 | lncRNA | downstream | 168068 | 27992062 ~ 27992282 (+) | False | AMCG00016707 |
| TU18886 | lncRNA | downstream | 168594 | 27992588 ~ 27992792 (+) | False | AMCG00016707 |
| TU18926 | lncRNA | downstream | 292924 | 28116918 ~ 28117190 (+) | True | G15224 |
| TU18928 | lncRNA | downstream | 294549 | 28118543 ~ 28119649 (+) | True | G15226 |
| AMCG00016698 | mRNA | upstream | 5480 | 27810648 ~ 27817193 (+) | True | AMCG00016698 |
| AMCG00016699 | mRNA | upstream | 23547 | 27777427 ~ 27799126 (+) | True | AMCG00016699 |
| AMCG00016696 | mRNA | upstream | 57860 | 27764574 ~ 27764813 (+) | True | AMCG00016696 |
| AMCG00016690 | mRNA | upstream | 196583 | 27613301 ~ 27626090 (+) | True | AMCG00016690 |
| AMCG00016689 | mRNA | upstream | 211901 | 27607216 ~ 27610772 (+) | True | AMCG00016689 |
| AMCG00016705 | mRNA | downstream | 5371 | 27829365 ~ 27833537 (+) | False | AMCG00016705 |
| AMCG00016706 | mRNA | downstream | 12707 | 27836701 ~ 27837772 (+) | False | AMCG00016706 |
| AMCG00016703 | mRNA | downstream | 38195 | 27862189 ~ 27871186 (+) | True | AMCG00016703 |
| AMCG00016702 | mRNA | downstream | 53454 | 27877448 ~ 27878030 (+) | False | AMCG00016702 |
| AMCG00016704 | mRNA | downstream | 57446 | 27881440 ~ 27888212 (+) | True | AMCG00016704 |
| TU18724 | other | upstream | 202754 | 27613105 ~ 27619919 (+) | False | AMCG00016690 |
| TU18716 | other | upstream | 223081 | 27588479 ~ 27599592 (+) | False | AMCG00016691 |
| TU18717 | other | upstream | 224025 | 27588479 ~ 27598648 (+) | False | AMCG00016691 |
| TU18699 | other | upstream | 275064 | 27545994 ~ 27547609 (+) | False | AMCG00016683 |
| TU18379 | other | upstream | 1165248 | 26605526 ~ 26657425 (+) | False | AMCG00016635 |
| TU18835 | other | downstream | 5274 | 27829268 ~ 27831694 (+) | True | AMCG00016705 |
| TU18876 | other | downstream | 48669 | 27872663 ~ 27878697 (+) | True | AMCG00016702 |
| TU18924 | other | downstream | 280743 | 28104737 ~ 28105711 (+) | True | G15223 |
| TU19419 | other | downstream | 2248944 | 30072938 ~ 30074896 (+) | False | AMCG00016772 |
| TU19422 | other | downstream | 2257260 | 30081254 ~ 30083528 (+) | False | AMCG00016772 |
