RNA id: AMCG00016700


Basic Information

Item Value
RNA id AMCG00016700
length 1026
RNA type mRNA
GC content 0.65
exon number 6
gene id AMCG00016700
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27806349 ~ 27809112 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGGAGACCGTGCACAAGCAGGGCATCTGGGTGGCAGAGGGGCTGCAGGACAGGCTGATGGACTATGAGGGATTCTGGCTGTTCGTGACCCACATGGGTGACCCCAAAGCCGCCTTCCTCCTCTGCTTCCCCATCACCTACTACCTGAGCCGCAGCACCGGTGTGGCCGTGGTCTGGGTGGCCGTCATTTCGGAGTGGCTGAACCTGGTTTTCAAATGGATGCTCTTTGGGGAGAGGCCATTCTGGTGGGTGGGGGAGTCTGGATTGTTCCGCCTGGACCAGCCACGGCTCAGGCAGTTCCCCTCCACCTGCGAGACGGGCCCGGGCAGCCCCTCCGGACACGCCATGGTGACGTCAGCCGTGTGGTTTGTGATGGCGACCGCTCTCTCGACTTTTCTCCACGCGCGCACCCGGAGTGTGGTGCTGAAGGCCGTGCCGTACCTGCTGTACCTGGCCATAGTCGTGGCGGTGGCCGTCTCCCGACTGTTCATACTGGCACACTTCCCTCACCAGGTGGTGGCCGGGTCCCTCACAGGCTTGACGCTGGGCTGGGCTCTGAGCTGGGTTGTCCCTGAGGGGAGGGGGCTGGGATTCTTCGTGCGAGTCTCAGGGGGGCTGCTGCTGGGGGCCCTGCTGCTGCAGTGGGGGCTGGAGAGCTGCGGTGTTGACCTGTCCTGGTCCATAGCGCTGGCCAGGCGGTGGTGTGCCCAGGCGGAGTGGATCCGGCTCGACACGACACCGCTCTCCTCTCTGATGCGGGACTGCGGGTCCCTGGTGGGGCTGGGCCTGGCACAGTGGTGGCGGCCCGGGGGCTGGGCACTCCCCTGGGCCCCACGCACACTATGCGTGGCCCTCTCTGCCATGGCTCTGTACCACATCAACAGACTGCCCCTGCCCACCAATCCCCCCAGCCTCTTCTACTGCCTCTTCTTCGCCAAGTTTGCCCTGGTGCCTTGTGTGGTCATCGCCCTGGTGCCTGGCCTGGTCCACCTGCTGACGGGGAAGAGGCTCAAGGACAAATAG

Function

GO: NA

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18858 lncRNA downstream 1307 27802129 ~ 27805042 (-) True G15172
TU18849 lncRNA downstream 9341 27796783 ~ 27797008 (-) True G15166
TU18848 lncRNA downstream 11369 27794592 ~ 27794980 (-) True G15165
TU18775 lncRNA downstream 253187 27550312 ~ 27553162 (-) True G15095
TU18755 lncRNA downstream 264509 27535325 ~ 27541840 (-) True G15079
TU18854 lncRNA upstream 1526 27810638 ~ 27815464 (-) True G15169
TU18892 lncRNA upstream 74527 27883639 ~ 27884430 (-) True G15200
TU18893 lncRNA upstream 75974 27885086 ~ 27886560 (-) True G15201
TU18895 lncRNA upstream 76850 27885962 ~ 27886560 (-) False G15201
TU18906 lncRNA upstream 155431 27964543 ~ 27966856 (-) True G15207
AMCG00016695 mRNA downstream 67920 27732315 ~ 27738429 (-) True AMCG00016695
AMCG00016694 mRNA downstream 98820 27701012 ~ 27707529 (-) True AMCG00016694
AMCG00016693 mRNA downstream 136937 27655748 ~ 27669412 (-) True AMCG00016693
AMCG00016692 mRNA downstream 155500 27643639 ~ 27650849 (-) True AMCG00016692
AMCG00016688 mRNA downstream 289376 27509645 ~ 27516973 (-) True AMCG00016688
AMCG00016701 mRNA upstream 31083 27840195 ~ 27842668 (-) True AMCG00016701
AMCG00016709 mRNA upstream 182535 27991647 ~ 27997674 (-) True AMCG00016709
AMCG00016713 mRNA upstream 283132 28092244 ~ 28107936 (-) True AMCG00016713
AMCG00016712 mRNA upstream 320942 28130054 ~ 28146016 (-) True AMCG00016712
AMCG00016714 mRNA upstream 338715 28147827 ~ 28148678 (-) True AMCG00016714
TU18749 other downstream 377698 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 402427 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 436210 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 527015 27268820 ~ 27279334 (-) True AMCG00016671
TU18448 other downstream 1234708 26568669 ~ 26571641 (-) False G14843
TU19143 other upstream 972360 28781472 ~ 28785507 (-) True AMCG00016732
TU19522 other upstream 2392347 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 2717180 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 4613946 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 4688395 32497507 ~ 32503252 (-) True AMCG00016859

Expression Profile