Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016709 |
| length | 1191 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 9 |
| gene id | AMCG00016709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 27991647 ~ 27997674 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18901 | lncRNA | downstream | 3218 | 27979546 ~ 27988429 (-) | True | G15206 |
| TU18900 | lncRNA | downstream | 3218 | 27982888 ~ 27988429 (-) | False | G15206 |
| TU18906 | lncRNA | downstream | 24791 | 27964543 ~ 27966856 (-) | True | G15207 |
| TU18893 | lncRNA | downstream | 105087 | 27885086 ~ 27886560 (-) | True | G15201 |
| TU18895 | lncRNA | downstream | 105087 | 27885962 ~ 27886560 (-) | False | G15201 |
| TU18931 | lncRNA | upstream | 5565 | 28003239 ~ 28058063 (-) | True | G15228 |
| TU18956 | lncRNA | upstream | 132338 | 28130012 ~ 28157200 (-) | False | AMCG00016712 |
| TU18959 | lncRNA | upstream | 163013 | 28160687 ~ 28160940 (-) | True | G15254 |
| TU19002 | lncRNA | upstream | 286688 | 28284362 ~ 28286445 (-) | True | G15291 |
| TU19067 | lncRNA | upstream | 453724 | 28451398 ~ 28451632 (-) | True | G15330 |
| AMCG00016701 | mRNA | downstream | 148979 | 27840195 ~ 27842668 (-) | True | AMCG00016701 |
| AMCG00016700 | mRNA | downstream | 182535 | 27806349 ~ 27809112 (-) | True | AMCG00016700 |
| AMCG00016695 | mRNA | downstream | 253218 | 27732315 ~ 27738429 (-) | True | AMCG00016695 |
| AMCG00016694 | mRNA | downstream | 284118 | 27701012 ~ 27707529 (-) | True | AMCG00016694 |
| AMCG00016693 | mRNA | downstream | 322235 | 27655748 ~ 27669412 (-) | True | AMCG00016693 |
| AMCG00016713 | mRNA | upstream | 94570 | 28092244 ~ 28107936 (-) | True | AMCG00016713 |
| AMCG00016712 | mRNA | upstream | 132380 | 28130054 ~ 28146016 (-) | True | AMCG00016712 |
| AMCG00016714 | mRNA | upstream | 150153 | 28147827 ~ 28148678 (-) | True | AMCG00016714 |
| AMCG00016719 | mRNA | upstream | 198753 | 28196427 ~ 28209980 (-) | True | AMCG00016719 |
| AMCG00016716 | mRNA | upstream | 214170 | 28211844 ~ 28214306 (-) | True | AMCG00016716 |
| TU18749 | other | downstream | 562996 | 27424893 ~ 27428651 (-) | True | G15076 |
| TU18738 | other | downstream | 587725 | 27401676 ~ 27403922 (-) | True | G15067 |
| TU18673 | other | downstream | 621508 | 27369590 ~ 27370139 (-) | True | G15026 |
| TU18636 | other | downstream | 712313 | 27268820 ~ 27279334 (-) | True | AMCG00016671 |
| TU18448 | other | downstream | 1420006 | 26568669 ~ 26571641 (-) | False | G14843 |
| TU19143 | other | upstream | 783798 | 28781472 ~ 28785507 (-) | True | AMCG00016732 |
| TU19522 | other | upstream | 2203785 | 30201459 ~ 30202351 (-) | True | G15706 |
| TU19613 | other | upstream | 2528618 | 30526292 ~ 30529500 (-) | True | G15787 |
| TU20184 | other | upstream | 4425384 | 32423058 ~ 32423438 (-) | True | G16247 |
| TU20188 | other | upstream | 4499833 | 32497507 ~ 32503252 (-) | True | AMCG00016859 |
