RNA id: AMCG00016765


Basic Information

Item Value
RNA id AMCG00016765
length 2098
RNA type mRNA
GC content 0.52
exon number 5
gene id AMCG00016765
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30067321 ~ 30071224 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTTCCTACTAATAACTGTTTTAGGACTTTGTTTCGCCctacagaaaaggaaaagaccAAAATAAACCCACTTATCCTAAAAACAAGTCACGTGATGTCTTTGGTTGGCCAATGGCTGTGCGTGGTGGTTGGGGGACGAGCAGATTAGCAAGGTACTGCTGGAAGACAGGACACTGACACAGACTGCTGTTTATCAGTGCAGGCTTACCCCCATGGCTGAAAGGTTAAGGGAACTGTCCTGGATTCCCTGAAAGGCAAACAAATACACCTGATCTGCTATAAAGTCAGGCAGGGGGGGACAGCAGTGCAGTTCTGGGAGTTCAGCGGTGCTGCAGTAGAGTCGTGCTCAGAGACACTCAGAGGGACGTGACTGTTGGCTCATGGACTGGCTGCACAGTGCTGGAGTGGACGTGGCTGTCCACCTGCAGGCCCGGTTCAGCGCCTACGAGGACTGGTTCCACCTGGCCTCCTCCGTGGCCGACCTGCACACGCCCATCTTCATCTTCTTCCCCCTGTGGTTCCACCTGCGCCCGTCAGTGGGCGTCAAGCTCATCTGGGTGGCCGTGATAGGGGACTGGCTCAATCTGGTGTTGAAATGGGTTCTGTTTGGAGAGAGGCCCTATTGGTGGGTCCACGAGACACAGTTCTATGGTTCCATTCCGGCGCCCGTGCTGCGGCAGTCCCCCATCACCTGTGAAACTGGGCCAGGCAGTCCCTCGGGCCACGCCATGGGATCCGCGGGGGTGTGGTATGTGATGGTAACGGCTGTACTCTCCATTGCCTCTGAGAAAAAGCACTCCTCTCTCCTGACTGGAGCCCTGCACGTGGTACTGTGGACCCTGCTGTGTGCGGTGGAGCTGATCGTTTGCATGTCCAGGGTCTATGTTGCTGCCCATTTCCCACACCAGGTCATCACAGGTGTCATCTCAGGCATCATCGTGGCGGAGGTGTTTTCCCGAGTGCAGTGGATCTACCGTGCCAATATGATGAGGTACCTCCTCACCACTCTGTTCCTGCTGACCTTTGCTCTGGGCTTCTATCTGCTGCTGCTCGCGCTGGGCGTGGACCTGCTCTGGACGCTGGAGAAAGCGAAGCGGTGGTGCGTGCGAGCCGAGTGGGTCCACATGGACACCACGCCCTTTGCCAGCCTGTTGCGCAACCTCGGCACCCTATTCGGCCTTGGGCTGGGCCTGCACTCGCCGCTCTACACTGAGAGAAAGCCGGGCCGCAGCGCCCCCTTCAGACTAGGCTGCATCACCgcctcgctgctgctgctgcagctcctgGATCTGTTTCACTTCTCTTCTGAAAATGAGCTGCTCTTCTACATGCTCTCCTTCTGCAAGAGCGCCACTGCCCCATTTATCACTGTGGCCCTCGTACCCTGGGCCCTCTCTGGCTTCTGTCAGCACCAGGGCAGGAAGAAGGACTGGTGAACTCAGAGGGGTGCCACATTCACCCACGCAGGTTGAGCACCCCACCAGGGAGTCTCTGCTTTGATATCCGCTGACACCGAATCGGTGCAATCATCAGCACAGAGGATGAATTAACTCCTGGCCAATTCCCATGATTGTGGCCAGAATCCAAGGTCTGAAATGTTTGAGCACCAGACTGCAGTATGCCTGTGTTTGTGCTTTGAAGCTGTAAACGAAACGCTAGATGAAAATGTACTATTTCACTTGGTGAGCACTTGATGAAAATGCTATGAgaatgtatttctattttattgtttttaaattgagcCTTGTTGGCTATTAAAATACAGGAGAGAAGAATCCAAGGTGTAGCCTCAGTCTTCTGCCCAGAGTAAGAGTAACATAAAGTAACACAAGTAATAGCACGTGTAAGTGGTGTTTCCCAATCTTGTCAAGtccaacacacacatgtacttCACTTCCCGCCTTCCCACCCGAGCATTAACTTGAAAACAACACTAAATTTCAGTGAAGAGAGcattattttgattgaattaACTACATTTTGCATAGTTTTGATGTGGCACCTCTTGTCTATGCATTGGTGGCTGGCCACAAAGAGGGAGAATACTTGATTCACTGTTTTCCATATCGGCATGTCatgtacatacagtataatgcAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19480 lncRNA downstream 22756 30042575 ~ 30044565 (-) True G15675
TU19476 lncRNA downstream 25446 30038790 ~ 30041875 (-) True G15673
TU19477 lncRNA downstream 25446 30039795 ~ 30041875 (-) False G15673
TU19365 lncRNA downstream 260188 29802895 ~ 29807133 (-) True G15585
TU19300 lncRNA downstream 802654 29261312 ~ 29264667 (-) True G15525
TU19499 lncRNA upstream 38229 30109453 ~ 30113284 (-) True G15690
TU19524 lncRNA upstream 133598 30204822 ~ 30205115 (-) True G15708
TU19527 lncRNA upstream 136463 30207687 ~ 30208537 (-) True G15711
TU19535 lncRNA upstream 162324 30233548 ~ 30236867 (-) True G15716
TU19567 lncRNA upstream 358705 30429929 ~ 30431998 (-) True G15746
AMCG00016768 mRNA downstream 31279 30019515 ~ 30036042 (-) True AMCG00016768
AMCG00016767 mRNA downstream 53386 30008137 ~ 30013935 (-) True AMCG00016767
AMCG00016766 mRNA downstream 70464 29993530 ~ 29996857 (-) True AMCG00016766
AMCG00016762 mRNA downstream 162665 29893213 ~ 29904656 (-) True AMCG00016762
AMCG00016758 mRNA downstream 352856 29701416 ~ 29714465 (-) True AMCG00016758
AMCG00016774 mRNA upstream 17623 30088847 ~ 30099607 (-) True AMCG00016774
AMCG00016773 mRNA upstream 52627 30123851 ~ 30139691 (-) True AMCG00016773
AMCG00016775 mRNA upstream 90569 30161793 ~ 30174288 (-) True AMCG00016775
AMCG00016779 mRNA upstream 145020 30216244 ~ 30223409 (-) True AMCG00016779
AMCG00016780 mRNA upstream 165750 30236974 ~ 30241569 (-) True AMCG00016780
TU19143 other downstream 1281814 28781472 ~ 28785507 (-) True AMCG00016732
TU18749 other downstream 2638670 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 2663399 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 2697182 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 2787987 27268820 ~ 27279334 (-) True AMCG00016671
TU19522 other upstream 130235 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 455068 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 2351834 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 2426283 32497507 ~ 32503252 (-) True AMCG00016859
TU20192 other upstream 2426283 32497507 ~ 32498895 (-) False AMCG00016859

Expression Profile