RNA id: AMCG00016775


Basic Information

Item Value
RNA id AMCG00016775
length 207
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00016775
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30161793 ~ 30174288 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCAGGAAACAgagccacacagacagaccGGGAAATCACTTCGATCAATATGAAGAGGggcagctggagctggagcaggcatCCCTGGACAAGCCCATTGAATCGGCACGGTTGCTGGCAGAGGATGCCATTCTGGCCAACTTACACAACACGTTTACCGCACTGGACGTTTACATGCTGGTCTGCCAGACTACTCCAATGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19499 lncRNA downstream 48509 30109453 ~ 30113284 (-) True G15690
TU19480 lncRNA downstream 117228 30042575 ~ 30044565 (-) True G15675
TU19476 lncRNA downstream 119918 30038790 ~ 30041875 (-) True G15673
TU19477 lncRNA downstream 119918 30039795 ~ 30041875 (-) False G15673
TU19365 lncRNA downstream 354660 29802895 ~ 29807133 (-) True G15585
TU19524 lncRNA upstream 30534 30204822 ~ 30205115 (-) True G15708
TU19527 lncRNA upstream 33399 30207687 ~ 30208537 (-) True G15711
TU19535 lncRNA upstream 59260 30233548 ~ 30236867 (-) True G15716
TU19567 lncRNA upstream 255641 30429929 ~ 30431998 (-) True G15746
TU19678 lncRNA upstream 824346 30998634 ~ 31002128 (-) True G15845
AMCG00016773 mRNA downstream 22102 30123851 ~ 30139691 (-) True AMCG00016773
AMCG00016774 mRNA downstream 62186 30088847 ~ 30099607 (-) True AMCG00016774
AMCG00016765 mRNA downstream 90569 30067321 ~ 30071224 (-) True AMCG00016765
AMCG00016768 mRNA downstream 125751 30019515 ~ 30036042 (-) True AMCG00016768
AMCG00016767 mRNA downstream 147858 30008137 ~ 30013935 (-) True AMCG00016767
AMCG00016779 mRNA upstream 41956 30216244 ~ 30223409 (-) True AMCG00016779
AMCG00016780 mRNA upstream 62686 30236974 ~ 30241569 (-) True AMCG00016780
AMCG00016794 mRNA upstream 290869 30465157 ~ 30467804 (-) True AMCG00016794
AMCG00016792 mRNA upstream 376840 30551128 ~ 30557792 (-) True AMCG00016792
AMCG00016793 mRNA upstream 383968 30558256 ~ 30563594 (-) True AMCG00016793
TU19143 other downstream 1376286 28781472 ~ 28785507 (-) True AMCG00016732
TU18749 other downstream 2733142 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 2757871 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 2791654 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 2882459 27268820 ~ 27279334 (-) True AMCG00016671
TU19522 other upstream 27171 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 352004 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 2248770 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 2323219 32497507 ~ 32503252 (-) True AMCG00016859
TU20192 other upstream 2323219 32497507 ~ 32498895 (-) False AMCG00016859

Expression Profile