Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016855 |
| length | 627 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 1 |
| gene id | AMCG00016855 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 32497882 ~ 32498508 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00680 | Methane metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20144 | lncRNA | upstream | 55297 | 32438254 ~ 32442585 (+) | True | G16211 |
| TU20094 | lncRNA | upstream | 235210 | 32261711 ~ 32262672 (+) | True | G16169 |
| TU20089 | lncRNA | upstream | 244653 | 32251814 ~ 32253229 (+) | False | AMCG00016841 |
| TU19924 | lncRNA | upstream | 742455 | 31755042 ~ 31755427 (+) | True | G16037 |
| TU19869 | lncRNA | upstream | 853367 | 31615220 ~ 31644515 (+) | True | G15995 |
| TU20241 | lncRNA | downstream | 359043 | 32857551 ~ 32859016 (+) | True | G16290 |
| TU20283 | lncRNA | downstream | 483271 | 32981779 ~ 32982330 (+) | True | G16323 |
| TU20320 | lncRNA | downstream | 681197 | 33179705 ~ 33179940 (+) | True | G16350 |
| TU20321 | lncRNA | downstream | 681731 | 33180239 ~ 33180439 (+) | True | G16351 |
| TU20374 | lncRNA | downstream | 826586 | 33325094 ~ 33328342 (+) | True | G16395 |
| AMCG00016853 | mRNA | upstream | 2135 | 32489913 ~ 32495747 (+) | True | AMCG00016853 |
| AMCG00016852 | mRNA | upstream | 16075 | 32480664 ~ 32481807 (+) | True | AMCG00016852 |
| AMCG00016851 | mRNA | upstream | 63744 | 32393881 ~ 32434138 (+) | True | AMCG00016851 |
| AMCG00016848 | mRNA | upstream | 194413 | 32284756 ~ 32303469 (+) | True | AMCG00016848 |
| AMCG00016841 | mRNA | upstream | 237255 | 32251808 ~ 32260627 (+) | True | AMCG00016841 |
| AMCG00016854 | mRNA | downstream | 1183 | 32499691 ~ 32503372 (+) | False | AMCG00016854 |
| AMCG00016861 | mRNA | downstream | 92259 | 32590767 ~ 32607382 (+) | True | AMCG00016861 |
| AMCG00016863 | mRNA | downstream | 274567 | 32773075 ~ 32777472 (+) | True | AMCG00016863 |
| AMCG00016865 | mRNA | downstream | 311577 | 32810085 ~ 32856301 (+) | True | AMCG00016865 |
| AMCG00016866 | mRNA | downstream | 397251 | 32895759 ~ 32921227 (+) | True | AMCG00016866 |
| TU19916 | other | upstream | 763566 | 31728556 ~ 31734316 (+) | False | AMCG00016830 |
| TU19913 | other | upstream | 770865 | 31721939 ~ 31727017 (+) | True | AMCG00016829 |
| TU19688 | other | upstream | 1436737 | 31059340 ~ 31061145 (+) | True | G15855 |
| TU19453 | other | upstream | 2261041 | 30236454 ~ 30236841 (+) | True | G15659 |
| TU19434 | other | upstream | 2384598 | 30109599 ~ 30113284 (+) | True | AMCG00016770 |
| TU20166 | other | downstream | 548 | 32499056 ~ 32503256 (+) | True | AMCG00016854 |
| TU20164 | other | downstream | 1068 | 32499576 ~ 32503256 (+) | False | AMCG00016854 |
| TU20165 | other | downstream | 2288 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU20240 | other | downstream | 357853 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20517 | other | downstream | 1170121 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
