Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016873 |
| length | 216 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | AMCG00016873 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 33012918 ~ 33021870 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005581 | collagen trimer | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20283 | lncRNA | upstream | 30588 | 32981779 ~ 32982330 (+) | True | G16323 |
| TU20241 | lncRNA | upstream | 153902 | 32857551 ~ 32859016 (+) | True | G16290 |
| TU20144 | lncRNA | upstream | 570333 | 32438254 ~ 32442585 (+) | True | G16211 |
| TU20094 | lncRNA | upstream | 750246 | 32261711 ~ 32262672 (+) | True | G16169 |
| TU20089 | lncRNA | upstream | 759689 | 32251814 ~ 32253229 (+) | False | AMCG00016841 |
| TU20320 | lncRNA | downstream | 157835 | 33179705 ~ 33179940 (+) | True | G16350 |
| TU20321 | lncRNA | downstream | 158369 | 33180239 ~ 33180439 (+) | True | G16351 |
| TU20374 | lncRNA | downstream | 303224 | 33325094 ~ 33328342 (+) | True | G16395 |
| TU20376 | lncRNA | downstream | 306927 | 33328797 ~ 33333746 (+) | True | AMCG00016880 |
| TU20498 | lncRNA | downstream | 624618 | 33646488 ~ 33648455 (+) | False | AMCG00016898 |
| AMCG00016872 | mRNA | upstream | 22960 | 32986580 ~ 32989958 (+) | True | AMCG00016872 |
| AMCG00016866 | mRNA | upstream | 91691 | 32895759 ~ 32921227 (+) | True | AMCG00016866 |
| AMCG00016865 | mRNA | upstream | 156617 | 32810085 ~ 32856301 (+) | True | AMCG00016865 |
| AMCG00016863 | mRNA | upstream | 235446 | 32773075 ~ 32777472 (+) | True | AMCG00016863 |
| AMCG00016861 | mRNA | upstream | 405536 | 32590767 ~ 32607382 (+) | True | AMCG00016861 |
| AMCG00016875 | mRNA | downstream | 13432 | 33035302 ~ 33109567 (+) | True | AMCG00016875 |
| AMCG00016874 | mRNA | downstream | 126621 | 33148491 ~ 33151617 (+) | True | AMCG00016874 |
| AMCG00016885 | mRNA | downstream | 154401 | 33176271 ~ 33177932 (+) | True | AMCG00016885 |
| AMCG00016886 | mRNA | downstream | 185602 | 33207472 ~ 33221284 (+) | True | AMCG00016886 |
| AMCG00016881 | mRNA | downstream | 199664 | 33221534 ~ 33244483 (+) | True | AMCG00016881 |
| TU20240 | other | upstream | 155478 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20166 | other | upstream | 509662 | 32499056 ~ 32503256 (+) | True | AMCG00016854 |
| TU20164 | other | upstream | 509662 | 32499576 ~ 32503256 (+) | False | AMCG00016854 |
| TU20165 | other | upstream | 509662 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU19916 | other | upstream | 1278602 | 31728556 ~ 31734316 (+) | False | AMCG00016830 |
| TU20517 | other | downstream | 646759 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
| TU20550 | other | downstream | 1025501 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU20555 | other | downstream | 1078445 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU21320 | other | downstream | 5474181 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU21955 | other | downstream | 9369427 | 42391297 ~ 42397787 (+) | True | G17697 |
