Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017080 |
| length | 1338 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 10 |
| gene id | AMCG00017080 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 44364606 ~ 44371508 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| id | description |
|---|---|
| K08812 | CAMKV; CaM kinase-like vesicle-associated |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22423 | lncRNA | upstream | 163568 | 44116966 ~ 44201038 (+) | True | G18084 |
| TU22414 | lncRNA | upstream | 261207 | 44102026 ~ 44103399 (+) | True | G18077 |
| TU22305 | lncRNA | upstream | 864130 | 43500170 ~ 43500476 (+) | True | G17987 |
| TU22306 | lncRNA | upstream | 893760 | 43470070 ~ 43470846 (+) | True | G17988 |
| TU22284 | lncRNA | upstream | 970107 | 43394293 ~ 43394499 (+) | True | G17969 |
| TU22469 | lncRNA | downstream | 5485 | 44376993 ~ 44377228 (+) | True | G18125 |
| TU22471 | lncRNA | downstream | 15935 | 44387443 ~ 44387949 (+) | True | G18127 |
| TU22536 | lncRNA | downstream | 251859 | 44623367 ~ 44667457 (+) | False | G18186 |
| TU22537 | lncRNA | downstream | 290881 | 44662389 ~ 44714164 (+) | True | G18186 |
| TU22555 | lncRNA | downstream | 297915 | 44669423 ~ 44670878 (+) | True | G18196 |
| AMCG00017079 | mRNA | upstream | 204135 | 44146712 ~ 44160471 (+) | True | AMCG00017079 |
| AMCG00017078 | mRNA | upstream | 226675 | 44126214 ~ 44137931 (+) | True | AMCG00017078 |
| AMCG00017070 | mRNA | upstream | 509282 | 43843414 ~ 43855324 (+) | True | AMCG00017070 |
| AMCG00017069 | mRNA | upstream | 523016 | 43825329 ~ 43841590 (+) | True | AMCG00017069 |
| AMCG00017068 | mRNA | upstream | 550288 | 43806964 ~ 43814318 (+) | True | AMCG00017068 |
| AMCG00017081 | mRNA | downstream | 1380 | 44372888 ~ 44385986 (+) | True | AMCG00017081 |
| AMCG00017082 | mRNA | downstream | 17404 | 44388912 ~ 44411339 (+) | True | AMCG00017082 |
| AMCG00017083 | mRNA | downstream | 74113 | 44445621 ~ 44453494 (+) | True | AMCG00017083 |
| AMCG00017084 | mRNA | downstream | 96611 | 44468119 ~ 44477790 (+) | True | AMCG00017084 |
| AMCG00017088 | mRNA | downstream | 285279 | 44656787 ~ 44658914 (+) | True | AMCG00017088 |
| TU22431 | other | upstream | 233004 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
| TU21955 | other | upstream | 1966819 | 42391297 ~ 42397787 (+) | True | G17697 |
| TU21320 | other | upstream | 5860974 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU20555 | other | upstream | 10263743 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU20550 | other | upstream | 10316886 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU22550 | other | downstream | 283144 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU23388 | other | downstream | 5031211 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
| TU23515 | other | downstream | 5342016 | 49713524 ~ 49721471 (+) | False | AMCG00017183 |
| TU23710 | other | downstream | 6180372 | 50551880 ~ 50552985 (+) | True | G19113 |
| TU23712 | other | downstream | 6187942 | 50559450 ~ 50561788 (+) | False | G19114 |
