RNA id: AMCG00017087


Basic Information

Item Value
RNA id AMCG00017087
length 243
RNA type mRNA
GC content 0.58
exon number 1
gene id AMCG00017087
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44565920 ~ 44566162 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCTGCACAGTCAGTGCCGAAGACAAAGCCGCAGCCGAGCGGTCCAAGATGATCGATAAAAACCTCCGGGAAGATGGGGAGAAGGCTGCCCGGGAGgtgaagctgctgctgctgggtaAGGAGGCAGGGGAGCTCCCTCTGCCCTGCTTATTGCGCTTTCATGCTGTCCATCTTGGAGGCTGTCGCGTAGGACTTGCTCGGCAGAGGAAGCAGAAATGGTGGTTGTTTCTTAGGGACTGA

Function

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22511 lncRNA downstream 177925 44387443 ~ 44387995 (-) True G18164
TU22503 lncRNA downstream 188699 44376997 ~ 44377221 (-) True G18156
TU22443 lncRNA downstream 427378 44136188 ~ 44138542 (-) True G18101
TU22403 lncRNA downstream 674013 43837177 ~ 43891907 (-) True G18066
TU22342 lncRNA downstream 931498 43633770 ~ 43634422 (-) False AMCG00017067
TU22583 lncRNA upstream 87293 44653455 ~ 44655994 (-) False AMCG00017091
TU22596 lncRNA upstream 233292 44799454 ~ 44829026 (-) True G18219
TU22678 lncRNA upstream 552128 45118290 ~ 45151671 (-) False AMCG00017105
TU22760 lncRNA upstream 1286900 45853062 ~ 45916620 (-) True G18352
TU22790 lncRNA upstream 1535798 46101960 ~ 46102188 (-) True G18364
AMCG00017086 mRNA downstream 62670 44483611 ~ 44503250 (-) True AMCG00017086
AMCG00017085 mRNA downstream 107366 44456778 ~ 44458554 (-) True AMCG00017085
AMCG00017077 mRNA downstream 440011 44102018 ~ 44125909 (-) True AMCG00017077
AMCG00017074 mRNA downstream 652497 43881278 ~ 43913423 (-) True AMCG00017074
AMCG00017075 mRNA downstream 693825 43857493 ~ 43872095 (-) True AMCG00017075
AMCG00017089 mRNA upstream 7362 44573524 ~ 44600280 (-) True AMCG00017089
AMCG00017094 mRNA upstream 67410 44633572 ~ 44634705 (-) True AMCG00017094
AMCG00017095 mRNA upstream 73925 44640087 ~ 44651849 (-) True AMCG00017095
AMCG00017091 mRNA upstream 87572 44653734 ~ 44656905 (-) True AMCG00017091
AMCG00017093 mRNA upstream 96257 44662419 ~ 44684879 (-) True AMCG00017093
TU22128 other downstream 1701304 42808711 ~ 42864616 (-) True G17842
TU21619 other downstream 3348689 41216651 ~ 41217231 (-) True G17421
TU21144 other downstream 6506981 38027483 ~ 38058939 (-) False AMCG00016959
TU21143 other downstream 6506981 38054665 ~ 38058939 (-) False AMCG00016959
TU21119 other downstream 6807449 37758157 ~ 37758471 (-) True G17032
TU23267 other upstream 3922965 48489127 ~ 48494349 (-) True AMCG00017158
TU23976 other upstream 6864693 51430855 ~ 51435068 (-) False AMCG00017234
TU23984 other upstream 6879425 51445587 ~ 51449786 (-) True G19335
TU23985 other upstream 6879425 51445587 ~ 51449786 (-) False G19335
TU24132 other upstream 7290084 51856246 ~ 51860142 (-) False AMCG00017251

Expression Profile