RNA id: AMCG00017122



Basic Information


Item Value
RNA id AMCG00017122
length 294
RNA type mRNA
GC content 0.49
exon number 6
gene id AMCG00017122
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46483937 ~ 46607444 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCGAACGCAAGCCGGACTCTCTCGGGCCGCTTCCAGACGGCTCCTGACAATTCATCTGGAGACATCTGTGTTGTGTCTGTCATCTATGCAAACGATGTGACAGGATTCCACGTGGGATTACTCAAACACGGTGAAGGAGACCGCCGGCTGACTGAGTTCATCACAGCACTGCCGTCCATCAAAACCCTGCTGCTCTTTTCACAATCCCAGCAAGAGAAAGCAACTCAAaATGGGAGATTCATTCATTATCGCACTGTATCCATCTACAGTAATAAGTGGTTGAAGAGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22837 lncRNA downstream 29541 46440069 ~ 46454396 (-) True G18405
TU22792 lncRNA downstream 377344 46102262 ~ 46106593 (-) True G18366
TU22790 lncRNA downstream 381749 46101960 ~ 46102188 (-) True G18364
TU22760 lncRNA downstream 567317 45853062 ~ 45916620 (-) True G18352
TU22678 lncRNA downstream 1332266 45118290 ~ 45151671 (-) False AMCG00017105
TU22974 lncRNA upstream 567202 47174646 ~ 47308372 (-) True G18519
TU22976 lncRNA upstream 570604 47178048 ~ 47196175 (-) False G18519
TU22990 lncRNA upstream 780454 47387898 ~ 47388821 (-) True G18529
TU22995 lncRNA upstream 818803 47426247 ~ 47428085 (-) True G18533
TU23024 lncRNA upstream 1019819 47627263 ~ 47627521 (-) True G18559
AMCG00017115 mRNA downstream 80636 46386418 ~ 46403301 (-) True AMCG00017115
AMCG00017116 mRNA downstream 101069 46372466 ~ 46382868 (-) True AMCG00017116
AMCG00017111 mRNA downstream 584091 45867027 ~ 45899846 (-) True AMCG00017111
AMCG00017110 mRNA downstream 818276 45662634 ~ 45665661 (-) True AMCG00017110
AMCG00017109 mRNA downstream 836719 45623126 ~ 45647218 (-) True AMCG00017109
AMCG00017126 mRNA upstream 299049 46906493 ~ 46916078 (-) True AMCG00017126
AMCG00017125 mRNA upstream 310916 46918360 ~ 46930810 (-) True AMCG00017125
AMCG00017132 mRNA upstream 439829 47047273 ~ 47051406 (-) True AMCG00017132
AMCG00017137 mRNA upstream 915338 47522782 ~ 47541031 (-) True AMCG00017137
AMCG00017136 mRNA upstream 934649 47542093 ~ 47550598 (-) True AMCG00017136
TU22128 other downstream 3619321 42808711 ~ 42864616 (-) True G17842
TU21619 other downstream 5266706 41216651 ~ 41217231 (-) True G17421
TU21144 other downstream 8424998 38027483 ~ 38058939 (-) False AMCG00016959
TU21143 other downstream 8424998 38054665 ~ 38058939 (-) False AMCG00016959
TU21119 other downstream 8725466 37758157 ~ 37758471 (-) True G17032
TU23267 other upstream 1881683 48489127 ~ 48494349 (-) True AMCG00017158
TU23976 other upstream 4823411 51430855 ~ 51435068 (-) False AMCG00017234
TU23984 other upstream 4838143 51445587 ~ 51449786 (-) True G19335
TU23985 other upstream 4838143 51445587 ~ 51449786 (-) False G19335
TU24132 other upstream 5248802 51856246 ~ 51860142 (-) False AMCG00017251

Expression Profile