RNA id: AMCG00017158


Basic Information

Item Value
RNA id AMCG00017158
length 186
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00017158
representative False

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 48489127 ~ 48494407 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGTCGTGTGGGGCATTTCATTGGTCAGCTGGAGACGCTGACGTCCTTCCTGTCCCCATGACTACAGAGGGAACCAGTCCTGCACGGCTGATGGAAAACCAGTACAAGGAccagaagaataagaagaaggATTACACCGTTTTGGCAGATGGAGCCcaaaagagaaatgcaaagcTTATCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU23201 lncRNA downstream 255554 48232690 ~ 48237413 (-) True G18709
TU23194 lncRNA downstream 268649 48224050 ~ 48224318 (-) True G18702
TU23178 lncRNA downstream 321857 48170158 ~ 48171110 (-) True G18690
TU23134 lncRNA downstream 427928 48062312 ~ 48065039 (-) True G18652
TU23133 lncRNA downstream 438345 48054208 ~ 48054622 (-) True G18651
TU23365 lncRNA upstream 866261 49360668 ~ 49360937 (-) True G18827
TU23366 lncRNA upstream 867253 49361660 ~ 49361926 (-) True G18828
TU23367 lncRNA upstream 869342 49363749 ~ 49364302 (-) True G18829
TU23368 lncRNA upstream 870799 49365206 ~ 49366441 (-) True G18830
TU23369 lncRNA upstream 873074 49367481 ~ 49368062 (-) True G18831
AMCG00017151 mRNA downstream 147216 48323815 ~ 48345751 (-) True AMCG00017151
AMCG00017148 mRNA downstream 231941 48249354 ~ 48261026 (-) True AMCG00017148
AMCG00017152 mRNA downstream 251475 48240084 ~ 48241492 (-) True AMCG00017152
AMCG00017150 mRNA downstream 260819 48225164 ~ 48232148 (-) True AMCG00017150
AMCG00017153 mRNA downstream 275508 48216639 ~ 48217459 (-) True AMCG00017153
AMCG00017159 mRNA upstream 9511 48503918 ~ 48559435 (-) True AMCG00017159
AMCG00017160 mRNA upstream 90069 48584476 ~ 48587639 (-) True AMCG00017160
AMCG00017168 mRNA upstream 807555 49301962 ~ 49318919 (-) True AMCG00017168
AMCG00017170 mRNA upstream 875169 49369576 ~ 49370958 (-) True AMCG00017170
AMCG00017169 mRNA upstream 882116 49376523 ~ 49383368 (-) True AMCG00017169
TU22128 other downstream 5628351 42808711 ~ 42864616 (-) True G17842
TU21619 other downstream 7275736 41216651 ~ 41217231 (-) True G17421
TU21144 other downstream 10434028 38027483 ~ 38058939 (-) False AMCG00016959
TU21143 other downstream 10434028 38054665 ~ 38058939 (-) False AMCG00016959
TU21119 other downstream 10734496 37758157 ~ 37758471 (-) True G17032
TU23976 other upstream 2936448 51430855 ~ 51435068 (-) False AMCG00017234
TU23984 other upstream 2951180 51445587 ~ 51449786 (-) True G19335
TU23985 other upstream 2951180 51445587 ~ 51449786 (-) False G19335
TU24132 other upstream 3361839 51856246 ~ 51860142 (-) False AMCG00017251
TU24337 other upstream 4364183 52858590 ~ 52866419 (-) False AMCG00017292

Expression Profile