RNA id: AMCG00017223


Basic Information

Item Value
RNA id AMCG00017223
length 261
RNA type mRNA
GC content 0.64
exon number 1
gene id AMCG00017223
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50898113 ~ 50898373 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAAACCCCGACCGAGAACCCCAGCAAGGCGGCGGAGTATCTGAAGGAGCTCAATAAAATCATCGAGACGCAGCAGGAGTTGCTGGAGAAGCAGAGGAGTCGCATcgaggagctggagcagcaaGTGGCCGAGCTGTGCCGGGAGAACGGCTGCCTGAAGGAGCAGCACCAGCGGCACCTGGCCACCTGCAGGCTGCAGCCGGGCGCCGGACACCCCGCCCTGGGGGCCATCAGGGAACATGCTGGGCAGGAGAAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU23757 lncRNA downstream 259342 50637315 ~ 50638771 (-) True G19150
TU23756 lncRNA downstream 259342 50637869 ~ 50638771 (-) False G19150
TU23747 lncRNA downstream 275674 50622181 ~ 50622439 (-) True G19141
TU23741 lncRNA downstream 327390 50568350 ~ 50570723 (-) True G19137
TU23740 lncRNA downstream 335197 50561023 ~ 50562916 (-) True G19136
TU23886 lncRNA upstream 266985 51165358 ~ 51165675 (-) True G19259
TU23900 lncRNA upstream 302558 51200931 ~ 51212373 (-) False AMCG00017232
TU23960 lncRNA upstream 397458 51295831 ~ 51296743 (-) True G19316
TU23977 lncRNA upstream 539507 51437880 ~ 51438093 (-) True G19330
TU24212 lncRNA upstream 1649364 52547737 ~ 52548050 (-) True G19516
AMCG00017219 mRNA downstream 144772 50731649 ~ 50753341 (-) True AMCG00017219
AMCG00017221 mRNA downstream 175892 50712988 ~ 50722221 (-) True AMCG00017221
AMCG00017218 mRNA downstream 203922 50692600 ~ 50694191 (-) True AMCG00017218
AMCG00017220 mRNA downstream 218915 50676251 ~ 50679198 (-) True AMCG00017220
AMCG00017216 mRNA downstream 226749 50670588 ~ 50671364 (-) True AMCG00017216
AMCG00017222 mRNA upstream 18035 50916408 ~ 50955842 (-) True AMCG00017222
AMCG00017228 mRNA upstream 241465 51139838 ~ 51155195 (-) True AMCG00017228
AMCG00017232 mRNA upstream 285858 51184231 ~ 51200937 (-) True AMCG00017232
AMCG00017233 mRNA upstream 399987 51298360 ~ 51327317 (-) True AMCG00017233
AMCG00017235 mRNA upstream 445986 51344359 ~ 51363221 (-) True AMCG00017235
TU23267 other downstream 2403764 48489127 ~ 48494349 (-) True AMCG00017158
TU22128 other downstream 8033497 42808711 ~ 42864616 (-) True G17842
TU21619 other downstream 9680882 41216651 ~ 41217231 (-) True G17421
TU21144 other downstream 12839174 38027483 ~ 38058939 (-) False AMCG00016959
TU23976 other upstream 532482 51430855 ~ 51435068 (-) False AMCG00017234
TU23984 other upstream 547214 51445587 ~ 51449786 (-) True G19335
TU23985 other upstream 547214 51445587 ~ 51449786 (-) False G19335
TU24132 other upstream 957873 51856246 ~ 51860142 (-) False AMCG00017251
TU24337 other upstream 1960217 52858590 ~ 52866419 (-) False AMCG00017292

Expression Profile