Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017250 |
| length | 1035 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 4 |
| gene id | AMCG00017250 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 51863334 ~ 51865422 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0007602 | phototransduction | biological_process |
| GO:0018298 | protein-chromophore linkage | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0009881 | photoreceptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU23977 | lncRNA | downstream | 425241 | 51437880 ~ 51438093 (-) | True | G19330 |
| TU23960 | lncRNA | downstream | 566591 | 51295831 ~ 51296743 (-) | True | G19316 |
| TU23900 | lncRNA | downstream | 650961 | 51200931 ~ 51212373 (-) | False | AMCG00017232 |
| TU23886 | lncRNA | downstream | 697659 | 51165358 ~ 51165675 (-) | True | G19259 |
| TU23756 | lncRNA | downstream | 1224563 | 50637869 ~ 50638771 (-) | False | G19150 |
| TU24212 | lncRNA | upstream | 682315 | 52547737 ~ 52548050 (-) | True | G19516 |
| TU24251 | lncRNA | upstream | 783586 | 52649008 ~ 52665182 (-) | True | G19548 |
| TU24254 | lncRNA | upstream | 814531 | 52679953 ~ 52691186 (-) | True | G19551 |
| TU24316 | lncRNA | upstream | 903480 | 52768902 ~ 52769415 (-) | True | G19604 |
| TU24389 | lncRNA | upstream | 1144456 | 53009878 ~ 53010218 (-) | True | G19663 |
| AMCG00017251 | mRNA | downstream | 3067 | 51846596 ~ 51860267 (-) | True | AMCG00017251 |
| AMCG00017249 | mRNA | downstream | 25545 | 51830852 ~ 51837789 (-) | True | AMCG00017249 |
| AMCG00017245 | mRNA | downstream | 150812 | 51693098 ~ 51712522 (-) | True | AMCG00017245 |
| AMCG00017241 | mRNA | downstream | 178174 | 51667548 ~ 51685160 (-) | True | AMCG00017241 |
| AMCG00017244 | mRNA | downstream | 235559 | 51624052 ~ 51627775 (-) | True | AMCG00017244 |
| AMCG00017254 | mRNA | upstream | 158861 | 52024283 ~ 52029687 (-) | True | AMCG00017254 |
| AMCG00017255 | mRNA | upstream | 227005 | 52092427 ~ 52104090 (-) | True | AMCG00017255 |
| AMCG00017256 | mRNA | upstream | 262709 | 52128131 ~ 52140149 (-) | True | AMCG00017256 |
| AMCG00017257 | mRNA | upstream | 308440 | 52173862 ~ 52177582 (-) | True | AMCG00017257 |
| AMCG00017260 | mRNA | upstream | 347395 | 52212817 ~ 52218105 (-) | True | AMCG00017260 |
| TU24132 | other | downstream | 3192 | 51856246 ~ 51860142 (-) | False | AMCG00017251 |
| TU23984 | other | downstream | 413548 | 51445587 ~ 51449786 (-) | True | G19335 |
| TU23985 | other | downstream | 413548 | 51445587 ~ 51449786 (-) | False | G19335 |
| TU23976 | other | downstream | 428266 | 51430855 ~ 51435068 (-) | False | AMCG00017234 |
| TU23267 | other | downstream | 3368985 | 48489127 ~ 48494349 (-) | True | AMCG00017158 |
| TU24337 | other | upstream | 993168 | 52858590 ~ 52866419 (-) | False | AMCG00017292 |
| TU24480 | other | upstream | 1517918 | 53383340 ~ 53387709 (-) | True | G19730 |
| TU24476 | other | upstream | 1520674 | 53386096 ~ 53387709 (-) | False | G19730 |
| TU24477 | other | upstream | 1520674 | 53386096 ~ 53387709 (-) | False | G19730 |
| TU24478 | other | upstream | 1520674 | 53386096 ~ 53387709 (-) | False | G19730 |
