RNA id: AMCG00017264


Basic Information

Item Value
RNA id AMCG00017264
length 264
RNA type mRNA
GC content 0.47
exon number 3
gene id AMCG00017264
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52285069 ~ 52290184 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAATCTCAGCATGCAGGACATGACACAGAGATAGAGCAGGTTGGGCTCTCGGTCGATGCTCTGCGATTGCGGTTGGAAGAAAAAGAGTCGTTTCTCAACAAGAAGTCCAAACAACTGCAGGACCTCACTGAAGAGAAGGGGACTCTGGCTGGGGAGATTAGGGATATGAAAGACATGCTCGAAGTGAAGGAGAGAAAGATTAATGTCCTTCAGAAAAAGCCCATGCTTTATCACGCACACCGCACAGAGgataaatcttaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU23977 lncRNA downstream 846976 51437880 ~ 51438093 (-) True G19330
TU23960 lncRNA downstream 988326 51295831 ~ 51296743 (-) True G19316
TU23900 lncRNA downstream 1072696 51200931 ~ 51212373 (-) False AMCG00017232
TU23886 lncRNA downstream 1119394 51165358 ~ 51165675 (-) True G19259
TU23756 lncRNA downstream 1646298 50637869 ~ 50638771 (-) False G19150
TU24212 lncRNA upstream 257553 52547737 ~ 52548050 (-) True G19516
TU24251 lncRNA upstream 358824 52649008 ~ 52665182 (-) True G19548
TU24254 lncRNA upstream 389769 52679953 ~ 52691186 (-) True G19551
TU24316 lncRNA upstream 478718 52768902 ~ 52769415 (-) True G19604
TU24389 lncRNA upstream 719694 53009878 ~ 53010218 (-) True G19663
AMCG00017258 mRNA downstream 15512 52258966 ~ 52269557 (-) True AMCG00017258
AMCG00017259 mRNA downstream 28067 52247004 ~ 52257002 (-) True AMCG00017259
AMCG00017260 mRNA downstream 66964 52212817 ~ 52218105 (-) True AMCG00017260
AMCG00017257 mRNA downstream 107487 52173862 ~ 52177582 (-) True AMCG00017257
AMCG00017256 mRNA downstream 144920 52128131 ~ 52140149 (-) True AMCG00017256
AMCG00017261 mRNA upstream 14572 52304756 ~ 52316156 (-) True AMCG00017261
AMCG00017263 mRNA upstream 42450 52332634 ~ 52335812 (-) True AMCG00017263
AMCG00017262 mRNA upstream 74640 52364824 ~ 52374860 (-) True AMCG00017262
AMCG00017268 mRNA upstream 102622 52392806 ~ 52403791 (-) True AMCG00017268
AMCG00017266 mRNA upstream 125976 52416160 ~ 52428053 (-) True AMCG00017266
TU24132 other downstream 424927 51856246 ~ 51860142 (-) False AMCG00017251
TU23984 other downstream 835283 51445587 ~ 51449786 (-) True G19335
TU23985 other downstream 835283 51445587 ~ 51449786 (-) False G19335
TU23976 other downstream 850001 51430855 ~ 51435068 (-) False AMCG00017234
TU23267 other downstream 3790720 48489127 ~ 48494349 (-) True AMCG00017158
TU24337 other upstream 568406 52858590 ~ 52866419 (-) False AMCG00017292
TU24480 other upstream 1093156 53383340 ~ 53387709 (-) True G19730
TU24476 other upstream 1095912 53386096 ~ 53387709 (-) False G19730
TU24477 other upstream 1095912 53386096 ~ 53387709 (-) False G19730
TU24478 other upstream 1095912 53386096 ~ 53387709 (-) False G19730

Expression Profile