RNA id: AMCG00017302



Basic Information


Item Value
RNA id AMCG00017302
length 414
RNA type mRNA
GC content 0.64
exon number 4
gene id AMCG00017302
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53339506 ~ 53343302 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCTCTCACCACGGGACACGCCGACTTCTCTGCGCCCGCCTCCACGGCTGCATTCTTCCTGGGCTCCACGGCCACTGGGGACGTGCGGGACAACGGCACCTCCGGGACCGCCGCGGTGACGACCATCGCCTCCAACGAGACCTCCGGCTTCAACTCCACGCAGCTGCCCCCGGCGCTGACAGGCAGCTCGGGCATGGGCATGGTGCTTGTGCCCTTTGGCATCATCACCGTCATCGGCCTGGCGGTTGCGATGGTCCTCTACATCAGGAAGCGCAAGAGgcTGGAGAAGCTGAGGCACCAGCTCATGCCTATGTATAACTTCGACCCGGCGGAGGAGCAGGATGACCAGGGGACCATCCAGAGGCCCAGTCGACTCGTCTTCACGGACGTGGCCAACGCCATCAACGCATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24425 lncRNA downstream 101097 53238206 ~ 53238409 (-) True G19687
TU24402 lncRNA downstream 124170 53205965 ~ 53215336 (-) False AMCG00017299
TU24389 lncRNA downstream 329288 53009878 ~ 53010218 (-) True G19663
TU24316 lncRNA downstream 570091 52768902 ~ 52769415 (-) True G19604
TU24254 lncRNA downstream 648320 52679953 ~ 52691186 (-) True G19551
TU24492 lncRNA upstream 74883 53418185 ~ 53419077 (-) True G19741
TU24529 lncRNA upstream 108816 53452118 ~ 53527652 (-) False AMCG00017313
TU24653 lncRNA upstream 510681 53853983 ~ 53854628 (-) True G19873
TU24655 lncRNA upstream 521608 53864910 ~ 53868777 (-) True G19875
TU24721 lncRNA upstream 551034 53894336 ~ 53914876 (-) True G19918
AMCG00017298 mRNA downstream 53028 53282465 ~ 53286478 (-) True AMCG00017298
AMCG00017299 mRNA downstream 126987 53194833 ~ 53212519 (-) True AMCG00017299
AMCG00017291 mRNA downstream 409667 52924823 ~ 52929839 (-) True AMCG00017291
AMCG00017293 mRNA downstream 421562 52912823 ~ 52917944 (-) True AMCG00017293
AMCG00017294 mRNA downstream 426863 52904340 ~ 52912643 (-) True AMCG00017294
AMCG00017309 mRNA upstream 49406 53392708 ~ 53396408 (-) True AMCG00017309
AMCG00017310 mRNA upstream 53318 53396620 ~ 53396829 (-) True AMCG00017310
AMCG00017313 mRNA upstream 181340 53524642 ~ 53531131 (-) True AMCG00017313
AMCG00017312 mRNA upstream 192545 53535847 ~ 53557888 (-) True AMCG00017312
AMCG00017315 mRNA upstream 270174 53613476 ~ 53626349 (-) True AMCG00017315
TU24337 other downstream 473087 52858590 ~ 52866419 (-) False AMCG00017292
TU24132 other downstream 1479364 51856246 ~ 51860142 (-) False AMCG00017251
TU23984 other downstream 1889720 51445587 ~ 51449786 (-) True G19335
TU23985 other downstream 1889720 51445587 ~ 51449786 (-) False G19335
TU23976 other downstream 1904438 51430855 ~ 51435068 (-) False AMCG00017234
TU24480 other upstream 40038 53383340 ~ 53387709 (-) True G19730
TU24476 other upstream 42794 53386096 ~ 53387709 (-) False G19730
TU24477 other upstream 42794 53386096 ~ 53387709 (-) False G19730
TU24478 other upstream 42794 53386096 ~ 53387709 (-) False G19730
TU24580 other upstream 332781 53676083 ~ 53728883 (-) True G19808

Expression Profile