RNA id: AMCG00017370


Basic Information

Item Value
RNA id AMCG00017370
length 1366
RNA type mRNA
GC content 0.61
exon number 10
gene id AMCG00017370
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54821136 ~ 54826385 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCACGCAAGACAGCACGCAAGACAGCACGCCACCGCTAACCCAGTACGCGAGTCTGCGGATTTGGACGCAGTCCTGGCCTGGATCGCAGACGAGAAGAAAACTGACGAATTGAATGTCGCCGGGTAATGAAAACCTCAGAAGACTACGATTGCTAAAGGAAATGAGCGCTTGTTCTTCCGGGTCACTGTAGACAGTCCACAGGAAGTGTCGCGCTAGGGGGTGGACATTAAAGCGGATTTTCCCAGCCGTGCGGTTGGATCAGTTCTGCTGCCTGCGCCAACCCGAgCTCTGACTGACAGCTGCCCCGGCCAATGGGGGCCTTCGGCAGGATGTGCGCCCGCCTGGGACACGCCCTCTCTCCACAGAAGATCTGGGGACTTAGCCTTGCCAGGGGGCTCTGCGACCATGGTGGGGCAGGGGGGGCGGTGTGCTGTCCCCCCCTGCCCTCTGTGGGACGACCCACAGTGGAGGGGTGCGTGGCGCTCTGGGAGGGGCTGTTCCACGAGAGGGGGGTCCCTGAGCCACGACTGTCCAGCGAATACATCATTGCACACATCCTGGGAGCCAAGACTCTGGCGAGCCTGGGCTCGGACAGACGCACAGAGCTGCTGACAGACGCACAGACGCGGCGGGTGTGGGAGCTGTGTGCCAAGCGCCTGCGGAGGATGCCTGTGCAGTACGAGCTGGTGGGGCTGGTGCTGACGGACCTGCGGGCTGGCGGTGGGGGGGACAGCCCACGGGTGCTGGAGGTGGGCTGTGGCTCCGGGGCAGTCGCTCTCAGCCTGCTGCACGGCCTGCCACAGgccagTGTGGTGGCCATGGACAGGAGCAGTGAGGCCATCTCTCTGACCAGGGCAAACGCACTCATgcTGGGGCTGCAGGATCGGCTGGAGGTGCTGCAGCTGGACGTGTCTCTGGACATGGCAACCCTGGAGCCCGAGATCCTGAGgaaGCTGTATCTGGAGGTAGAGCCCCGGCAGCCGGCGCTGGTGCAGCAGGCTGTGAGCGAGGGGCAGGAGGCGGGACTGCGGTACAGCGCCACCCACACGGACCTCTATGGCAGACCTCGGTTCTGTGTTTTGCAGAGAATCTAATACTGAGACTGGCAGAACCCAGGGCCCAGCCACCCAGCGacacacagcccagcccagttCTCCCACTGGGGATGAATTCTGCACTTTTTGTGACATTTCCTCTACTGGGATCCACAGCGTCTGTTCCAGGTCACGCCTGCATGGACAGAGctcttattgtgtgtgtataagtgtgtgtgtgttttctacaTGATCCGTGGTGCTGCGGTCCCTCCAGGCTGCAGAAGCAGATCAGATGCTTTTGTAAGACAGTGTTTACCCGTGAAGTAAA

Function

GO: NA

KEGG:

id description
K02493 hemK, prmC, HEMK; release factor glutamine methyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU25112 lncRNA upstream 23991 54795496 ~ 54797145 (+) True G20218
TU25057 lncRNA upstream 83267 54733020 ~ 54737869 (+) True G20177
TU25014 lncRNA upstream 205688 54615241 ~ 54615448 (+) True G20136
TU24949 lncRNA upstream 238737 54579081 ~ 54582399 (+) False G20085
TU24951 lncRNA upstream 265811 54552140 ~ 54555325 (+) True G20086
TU25126 lncRNA downstream 16591 54842976 ~ 54844239 (+) False AMCG00017369
AMCG00017381 mRNA upstream 12326 54808466 ~ 54808810 (+) False AMCG00017381
AMCG00017383 mRNA upstream 130309 54688923 ~ 54690827 (+) True AMCG00017383
AMCG00017364 mRNA upstream 147794 54666880 ~ 54673342 (+) True AMCG00017364
AMCG00017363 mRNA upstream 188564 54630638 ~ 54632572 (+) True AMCG00017363
AMCG00017361 mRNA upstream 325877 54493577 ~ 54495259 (+) True AMCG00017361
AMCG00017382 mRNA downstream 10352 54836737 ~ 54837616 (+) True AMCG00017382
AMCG00017369 mRNA downstream 16555 54842940 ~ 54846281 (+) True AMCG00017369
AMCG00017371 mRNA downstream 30441 54856826 ~ 54863910 (+) True AMCG00017371
TU25114 other upstream 12030 54808486 ~ 54809106 (+) True AMCG00017381
TU25035 other upstream 156610 54663311 ~ 54664526 (+) True G20156
TU24950 other upstream 238737 54573474 ~ 54582399 (+) True G20085
TU24970 other upstream 291932 54527752 ~ 54529204 (+) True G20099
TU24839 other upstream 502923 54307795 ~ 54318213 (+) False G20013

Expression Profile