RNA id: TU13305


Basic Information

Item Value
RNA id TU13305
length 264
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G10732
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 4336041 ~ 4336304 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

catgtaccatcaaatcttgaGTGAGAAGCTCCTTCCctgccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagacaatctgtggagggagctgaaggttcgagttgccatacgtcagcctcgaaaccttaatcacttggagaggatctgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU13277 lncRNA upstream 126396 4209381 ~ 4209645 (+) True G10707
TU13265 lncRNA upstream 356944 3977559 ~ 3979097 (+) True G10695
TU13214 lncRNA upstream 434619 3900576 ~ 3901422 (+) True G10654
TU13183 lncRNA upstream 515013 3777076 ~ 3821028 (+) True G10627
TU13131 lncRNA upstream 816450 3518888 ~ 3519591 (+) True G10584
TU13309 lncRNA downstream 35183 4371487 ~ 4373721 (+) True G10736
TU13310 lncRNA downstream 40003 4376307 ~ 4377663 (+) True G10737
TU13384 lncRNA downstream 248930 4585234 ~ 4585486 (+) True G10798
TU13379 lncRNA downstream 250244 4586548 ~ 4587637 (+) True G10794
TU13444 lncRNA downstream 571502 4907806 ~ 4912418 (+) True G10853
AMCG00016055 mRNA upstream 130727 4201763 ~ 4205314 (+) True AMCG00016055
AMCG00016056 mRNA upstream 147085 4160355 ~ 4188956 (+) True AMCG00016056
AMCG00016057 mRNA upstream 207163 4126490 ~ 4128878 (+) True AMCG00016057
AMCG00016051 mRNA upstream 369855 3949181 ~ 3966186 (+) True AMCG00016051
AMCG00016054 mRNA upstream 451739 3883360 ~ 3884302 (+) True AMCG00016054
AMCG00016060 mRNA downstream 133758 4470062 ~ 4477338 (+) True AMCG00016060
AMCG00016061 mRNA downstream 159514 4495818 ~ 4499954 (+) True AMCG00016061
AMCG00016067 mRNA downstream 196020 4532324 ~ 4553950 (+) True AMCG00016067
AMCG00016066 mRNA downstream 233887 4570191 ~ 4576419 (+) True AMCG00016066
AMCG00016076 mRNA downstream 711904 5048208 ~ 5108992 (+) True AMCG00016076
TU12970 other upstream 1565371 2759347 ~ 2770670 (+) False AMCG00016030
TU12971 other upstream 1574322 2759347 ~ 2761719 (+) False AMCG00016030
TU12972 other upstream 1574322 2759347 ~ 2761719 (+) True AMCG00016030
TU12903 other upstream 1848290 2485542 ~ 2487751 (+) True G10371
TU12879 other upstream 2022882 2312598 ~ 2313159 (+) True G10350
TU13312 other downstream 90842 4427146 ~ 4428059 (+) True G10739
TU13602 other downstream 2318408 6654712 ~ 6661668 (+) True AMCG00016079
TU13604 other downstream 2327782 6664086 ~ 6665548 (+) True G10981
TU14219 other downstream 4731977 9068281 ~ 9072022 (+) False AMCG00016136
TU14242 other downstream 4763116 9099420 ~ 9100036 (+) True G11509

Expression Profile