RNA id: TU14452


Basic Information

Item Value
RNA id TU14452
length 252
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G11680
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10014200 ~ 10014451 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cccaccccagaggcacctcaccacggagggtcaacggggcatccacacccaaggtctgatgagccatcacaacccaaagtctgttgatggtccaacccctccacccccgatggccagcgagaggcctcctccagagggaaaagcacagccagcagcactgataaagaactttctgatctccttgatGCTGTAATAAccatactgcctggaggggaggcaaccattaggcctaggccctaagccatggacccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14449 lncRNA downstream 23060 9990607 ~ 9991140 (-) True G11677
TU14447 lncRNA downstream 45417 9968577 ~ 9968783 (-) True G11675
TU14434 lncRNA downstream 318146 9695773 ~ 9696054 (-) True G11662
TU14430 lncRNA downstream 419247 9589735 ~ 9594953 (-) True G11658
TU14420 lncRNA downstream 470457 9543508 ~ 9543743 (-) True G11650
TU14460 lncRNA upstream 223044 10237495 ~ 10237800 (-) True G11688
TU14471 lncRNA upstream 314268 10328719 ~ 10329089 (-) True G11699
TU14472 lncRNA upstream 314695 10329146 ~ 10329591 (-) True G11700
TU14473 lncRNA upstream 315191 10329642 ~ 10329937 (-) True G11701
TU14486 lncRNA upstream 502101 10516552 ~ 10516762 (-) True G11712
AMCG00016171 mRNA downstream 94426 9904963 ~ 9919774 (-) True AMCG00016171
AMCG00016172 mRNA downstream 109258 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016167 mRNA downstream 141775 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016169 mRNA downstream 179918 9833338 ~ 9834282 (-) True AMCG00016169
AMCG00016165 mRNA downstream 246278 9767215 ~ 9767922 (-) True AMCG00016165
AMCG00016173 mRNA upstream 61004 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016176 mRNA upstream 819961 10834412 ~ 10847535 (-) False AMCG00016176
AMCG00016178 mRNA upstream 987289 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016177 mRNA upstream 1019815 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016179 mRNA upstream 1210005 11224456 ~ 11237516 (-) True AMCG00016179
TU14024 other downstream 1819768 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 6093776 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 6475007 3529252 ~ 3539193 (-) False AMCG00016046
TU13017 other downstream 6979017 3034422 ~ 3035183 (-) True G10478
TU12954 other downstream 7303515 2710399 ~ 2710685 (-) True G10420
TU14520 other upstream 832383 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other upstream 832480 10846931 ~ 10847811 (-) False AMCG00016176
TU14856 other upstream 2308710 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 2847648 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 2847648 12862099 ~ 12862870 (-) False AMCG00016226

Expression Profile