RNA id: TU14460


Basic Information

Item Value
RNA id TU14460
length 306
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G11688
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10237495 ~ 10237800 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aacaccatccccaccgtcaaacattggggtgtttttctgctaaggggacaggacaactgcaccgcatcaaagggacgatggacggggccatgtaccatcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14452 lncRNA downstream 223044 10014200 ~ 10014451 (-) True G11680
TU14449 lncRNA downstream 246355 9990607 ~ 9991140 (-) True G11677
TU14447 lncRNA downstream 268712 9968577 ~ 9968783 (-) True G11675
TU14434 lncRNA downstream 541441 9695773 ~ 9696054 (-) True G11662
TU14430 lncRNA downstream 642542 9589735 ~ 9594953 (-) True G11658
TU14471 lncRNA upstream 90919 10328719 ~ 10329089 (-) True G11699
TU14472 lncRNA upstream 91346 10329146 ~ 10329591 (-) True G11700
TU14473 lncRNA upstream 91842 10329642 ~ 10329937 (-) True G11701
TU14486 lncRNA upstream 278752 10516552 ~ 10516762 (-) True G11712
TU14507 lncRNA upstream 474262 10712062 ~ 10712266 (-) True G11733
AMCG00016173 mRNA downstream 119276 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016171 mRNA downstream 317721 9904963 ~ 9919774 (-) True AMCG00016171
AMCG00016172 mRNA downstream 332553 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016167 mRNA downstream 365070 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016169 mRNA downstream 403213 9833338 ~ 9834282 (-) True AMCG00016169
AMCG00016176 mRNA upstream 596612 10834412 ~ 10847535 (-) False AMCG00016176
AMCG00016178 mRNA upstream 763940 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016177 mRNA upstream 796466 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016179 mRNA upstream 986656 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016185 mRNA upstream 1206555 11444355 ~ 11445310 (-) True AMCG00016185
TU14024 other downstream 2043063 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 6317071 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 6698302 3529252 ~ 3539193 (-) False AMCG00016046
TU13017 other downstream 7202312 3034422 ~ 3035183 (-) True G10478
TU12954 other downstream 7526810 2710399 ~ 2710685 (-) True G10420
TU14520 other upstream 609034 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other upstream 609131 10846931 ~ 10847811 (-) False AMCG00016176
TU14856 other upstream 2085361 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 2624299 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 2624299 12862099 ~ 12862870 (-) False AMCG00016226

Expression Profile