RNA id: TU14516


Basic Information

Item Value
RNA id TU14516
length 217
lncRNA type intronic
GC content 0.38
exon number 1
gene id G11741
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10845186 ~ 10845402 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAAGTCAGAAATGCGTATTACTAGTAATTagcatttaattatgttataatAGAAGTTACTGGTTTAACCATTCGTCTTCTGATGAACTTTTTAATCTGCTCCATGACCTCCTCAGTCTTTAAGGTGTATATGATTGGATTAAGCAGAGGAGGCAGGGTGGCCGATAAAGAGGTGTTGAGGATCCTAGTGTTGGTGTCTATCCTTATGTTTATCCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14508 lncRNA downstream 129659 10715319 ~ 10715527 (-) True G11734
TU14507 lncRNA downstream 132920 10712062 ~ 10712266 (-) True G11733
TU14486 lncRNA downstream 328424 10516552 ~ 10516762 (-) True G11712
TU14473 lncRNA downstream 515249 10329642 ~ 10329937 (-) True G11701
TU14472 lncRNA downstream 515595 10329146 ~ 10329591 (-) True G11700
TU14529 lncRNA upstream 62451 10907853 ~ 10908076 (-) True G11751
TU14532 lncRNA upstream 98124 10943526 ~ 10943774 (-) True G11754
TU14537 lncRNA upstream 132781 10978183 ~ 10978394 (-) True G11759
TU14583 lncRNA upstream 495468 11340870 ~ 11341449 (-) True G11801
TU14587 lncRNA upstream 542329 11387731 ~ 11388125 (-) True G11805
AMCG00016173 mRNA downstream 726967 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016171 mRNA downstream 925412 9904963 ~ 9919774 (-) True AMCG00016171
AMCG00016172 mRNA downstream 940244 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016167 mRNA downstream 972761 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016169 mRNA downstream 1010904 9833338 ~ 9834282 (-) True AMCG00016169
AMCG00016178 mRNA upstream 156338 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016177 mRNA upstream 188864 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016179 mRNA upstream 379054 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016185 mRNA upstream 598953 11444355 ~ 11445310 (-) True AMCG00016185
AMCG00016183 mRNA upstream 626324 11471726 ~ 11475792 (-) True AMCG00016183
TU14024 other downstream 2650754 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 6924762 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 7305993 3529252 ~ 3539193 (-) False AMCG00016046
TU13017 other downstream 7810003 3034422 ~ 3035183 (-) True G10478
TU12954 other downstream 8134501 2710399 ~ 2710685 (-) True G10420
TU14520 other upstream 1432 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other upstream 1529 10846931 ~ 10847811 (-) False AMCG00016176
TU14856 other upstream 1477759 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 2016697 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 2016697 12862099 ~ 12862870 (-) False AMCG00016226

Expression Profile