RNA id: TU14529


Basic Information

Item Value
RNA id TU14529
length 224
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G11751
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10907853 ~ 10908076 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tatattttgaggaacagctcagagctgacaacataaacaatatacatgctgctcttcagacaaaccagaaataagataGAGTCCCACGTCATCTACTGCTAGGCAAACTGTGCAGATATGTCAACCGAAACTCTTGAGTGTGTTAGGGGTTATGATATCGGACATAttccatgtctgcctagcaactagatctgtaatatgtcctgCCCCAAAACTgacttctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14516 lncRNA downstream 62451 10845186 ~ 10845402 (-) True G11741
TU14508 lncRNA downstream 192326 10715319 ~ 10715527 (-) True G11734
TU14507 lncRNA downstream 195587 10712062 ~ 10712266 (-) True G11733
TU14486 lncRNA downstream 391091 10516552 ~ 10516762 (-) True G11712
TU14473 lncRNA downstream 577916 10329642 ~ 10329937 (-) True G11701
TU14532 lncRNA upstream 35450 10943526 ~ 10943774 (-) True G11754
TU14537 lncRNA upstream 70107 10978183 ~ 10978394 (-) True G11759
TU14583 lncRNA upstream 432794 11340870 ~ 11341449 (-) True G11801
TU14587 lncRNA upstream 479655 11387731 ~ 11388125 (-) True G11805
TU14589 lncRNA upstream 492131 11400207 ~ 11400418 (-) True G11807
AMCG00016176 mRNA downstream 60318 10834412 ~ 10847535 (-) False AMCG00016176
AMCG00016173 mRNA downstream 789634 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016171 mRNA downstream 988079 9904963 ~ 9919774 (-) True AMCG00016171
AMCG00016172 mRNA downstream 1002911 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016167 mRNA downstream 1035428 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016178 mRNA upstream 93664 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016177 mRNA upstream 126190 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016179 mRNA upstream 316380 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016185 mRNA upstream 536279 11444355 ~ 11445310 (-) True AMCG00016185
AMCG00016183 mRNA upstream 563650 11471726 ~ 11475792 (-) True AMCG00016183
TU14520 other downstream 60042 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other downstream 60042 10846931 ~ 10847811 (-) False AMCG00016176
TU14024 other downstream 2713421 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 6987429 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 7368660 3529252 ~ 3539193 (-) False AMCG00016046
TU14856 other upstream 1415085 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 1954023 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 1954023 12862099 ~ 12862870 (-) False AMCG00016226
TU15027 other upstream 1961764 12869840 ~ 12870560 (-) False AMCG00016226
TU15220 other upstream 2646509 13554585 ~ 13559184 (-) False AMCG00016246

Expression Profile