RNA id: TU14532


Basic Information

Item Value
RNA id TU14532
length 249
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G11754
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 10943526 ~ 10943774 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gcaacagcaagaggGCTTCTTGAGAACTTTGAAAAAGGGACCACTGTCCTGGGACTCCTTTTAGCCTCTATGGTCATAGAGGAGTTGGAGTGCCTGAATAGAAGCTTACAGAAGAGAACAGCTACAGTTGCTGGAATGCTTGCTGCAGTTGAGTGTGTGAAGAACACATTACAGGCAAAGAGGTCAGaggatacatttaaacagataTATGACAGAGCAACAGAAATGATTGGAAAGTTGAATTTACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14529 lncRNA downstream 35450 10907853 ~ 10908076 (-) True G11751
TU14516 lncRNA downstream 98124 10845186 ~ 10845402 (-) True G11741
TU14508 lncRNA downstream 227999 10715319 ~ 10715527 (-) True G11734
TU14507 lncRNA downstream 231260 10712062 ~ 10712266 (-) True G11733
TU14486 lncRNA downstream 426764 10516552 ~ 10516762 (-) True G11712
TU14537 lncRNA upstream 34409 10978183 ~ 10978394 (-) True G11759
TU14583 lncRNA upstream 397096 11340870 ~ 11341449 (-) True G11801
TU14587 lncRNA upstream 443957 11387731 ~ 11388125 (-) True G11805
TU14589 lncRNA upstream 456433 11400207 ~ 11400418 (-) True G11807
TU14598 lncRNA upstream 539788 11483562 ~ 11483793 (-) True G11814
AMCG00016176 mRNA downstream 95991 10834412 ~ 10847535 (-) False AMCG00016176
AMCG00016173 mRNA downstream 825307 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016171 mRNA downstream 1023752 9904963 ~ 9919774 (-) True AMCG00016171
AMCG00016172 mRNA downstream 1038584 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016167 mRNA downstream 1071101 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016178 mRNA upstream 57966 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016177 mRNA upstream 90492 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016179 mRNA upstream 280682 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016185 mRNA upstream 500581 11444355 ~ 11445310 (-) True AMCG00016185
AMCG00016183 mRNA upstream 527952 11471726 ~ 11475792 (-) True AMCG00016183
TU14520 other downstream 95715 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other downstream 95715 10846931 ~ 10847811 (-) False AMCG00016176
TU14024 other downstream 2749094 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 7023102 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 7404333 3529252 ~ 3539193 (-) False AMCG00016046
TU14856 other upstream 1379387 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 1918325 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 1918325 12862099 ~ 12862870 (-) False AMCG00016226
TU15027 other upstream 1926066 12869840 ~ 12870560 (-) False AMCG00016226
TU15220 other upstream 2610811 13554585 ~ 13559184 (-) False AMCG00016246

Expression Profile