Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU14644 |
| length | 627 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G11851 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 11729600 ~ 11730226 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016137 | glycoside metabolic process | biological_process |
| GO:0016139 | glycoside catabolic process | biological_process |
| GO:1901658 | glycosyl compound catabolic process | biological_process |
| GO:1901136 | carbohydrate derivative catabolic process | biological_process |
| id | description |
|---|---|
| ko00603 | Glycosphingolipid biosynthesis - globo and isoglobo series |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14643 | lncRNA | upstream | 2177 | 11726942 ~ 11727423 (+) | True | G11850 |
| TU14642 | lncRNA | upstream | 5999 | 11723197 ~ 11723601 (+) | True | G11849 |
| TU14641 | lncRNA | upstream | 7042 | 11722068 ~ 11722558 (+) | True | G11848 |
| TU14640 | lncRNA | upstream | 9192 | 11719779 ~ 11720408 (+) | True | G11847 |
| TU14639 | lncRNA | upstream | 9949 | 11718083 ~ 11719651 (+) | True | G11846 |
| TU14703 | lncRNA | downstream | 86778 | 11817004 ~ 11819065 (+) | True | G11905 |
| TU14713 | lncRNA | downstream | 118059 | 11848285 ~ 11851621 (+) | True | G11914 |
| TU14714 | lncRNA | downstream | 118059 | 11848285 ~ 11851621 (+) | False | G11914 |
| TU14762 | lncRNA | downstream | 270242 | 12000468 ~ 12005903 (+) | False | AMCG00016202 |
| TU14758 | lncRNA | downstream | 298073 | 12028299 ~ 12029121 (+) | False | G11953 |
| AMCG00016190 | mRNA | upstream | 12560 | 11680800 ~ 11717040 (+) | True | AMCG00016190 |
| AMCG00016186 | mRNA | upstream | 86190 | 11627693 ~ 11643410 (+) | True | AMCG00016186 |
| AMCG00016184 | mRNA | upstream | 199241 | 11515756 ~ 11530359 (+) | True | AMCG00016184 |
| AMCG00016180 | mRNA | upstream | 339288 | 11389809 ~ 11390312 (+) | True | AMCG00016180 |
| AMCG00016182 | mRNA | upstream | 359460 | 11369362 ~ 11370140 (+) | True | AMCG00016182 |
| AMCG00016193 | mRNA | downstream | 3652 | 11733878 ~ 11741377 (+) | True | AMCG00016193 |
| AMCG00016192 | mRNA | downstream | 11257 | 11741483 ~ 11749371 (+) | True | AMCG00016192 |
| AMCG00016191 | mRNA | downstream | 21292 | 11751518 ~ 11764647 (+) | True | AMCG00016191 |
| AMCG00016198 | mRNA | downstream | 51954 | 11782180 ~ 11791632 (+) | True | AMCG00016198 |
| AMCG00016196 | mRNA | downstream | 66462 | 11796688 ~ 11800796 (+) | True | AMCG00016196 |
| TU14432 | other | upstream | 2130444 | 9598815 ~ 9599156 (+) | True | G11660 |
| TU14381 | other | upstream | 2137951 | 9559464 ~ 9591649 (+) | True | AMCG00016159 |
| TU14288 | other | upstream | 2503355 | 9223412 ~ 9226245 (+) | True | G11545 |
| TU14242 | other | upstream | 2629564 | 9099420 ~ 9100036 (+) | True | G11509 |
| TU14219 | other | upstream | 2657578 | 9068281 ~ 9072022 (+) | False | AMCG00016136 |
| TU14724 | other | downstream | 138599 | 11868825 ~ 11871735 (+) | True | G11921 |
| TU14996 | other | downstream | 1047998 | 12778224 ~ 12781864 (+) | False | AMCG00016221 |
| TU15233 | other | downstream | 1891653 | 13621879 ~ 13627711 (+) | True | G12348 |
| TU15235 | other | downstream | 1901059 | 13631285 ~ 13631797 (+) | True | G12349 |
| TU15237 | other | downstream | 1905216 | 13635442 ~ 13637001 (+) | True | G12351 |
