RNA id: TU15723



Basic Information


Item Value
RNA id TU15723
length 306
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G12707
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15417023 ~ 15417518 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGGTTACCTTGCTGCAGAATAACACTCTCAGGATTGCAAACACTACAAAATCTGACGAAGGCAGCTATGTATGTCGCGCTGAGAATCAGTTTGGTTCTGCTGAAATGACGACGACTGTGTTGGTCAAAGAGGCCATGCGCCTGGAGCTGAGCCCAGCCAGAGTGGAGGTGACGGTGGGAGAAAGCGTTGTTCTCAGCTGCAAGGCCCTCCACGACCCTACTTTGGAAGTGTCCTTTTTGTGGTTATTGAACAGGCAGCCCCTCAACTTTAAACAAGAAGGCGGACATTTTGAATACATCAGAACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU15717 lncRNA downstream 223382 15193202 ~ 15193641 (-) True G12702
TU15634 lncRNA downstream 628605 14786993 ~ 14788418 (-) False AMCG00016293
TU15550 lncRNA downstream 953200 14463617 ~ 14463823 (-) True G12595
TU15547 lncRNA downstream 980492 14431612 ~ 14436531 (-) True G12594
TU15762 lncRNA upstream 129532 15547050 ~ 15605487 (-) True G12743
TU15855 lncRNA upstream 407393 15824911 ~ 15825237 (-) True G12807
TU15857 lncRNA upstream 411248 15828766 ~ 15829026 (-) True G12809
TU15858 lncRNA upstream 411837 15829355 ~ 15829567 (-) True G12810
TU15859 lncRNA upstream 417304 15834822 ~ 15835082 (-) True G12811
AMCG00016304 mRNA downstream 58689 15142256 ~ 15358334 (-) True AMCG00016304
AMCG00016302 mRNA downstream 274881 15140361 ~ 15142142 (-) True AMCG00016302
AMCG00016303 mRNA downstream 277164 15137408 ~ 15139859 (-) True AMCG00016303
AMCG00016294 mRNA downstream 565910 14849850 ~ 14851113 (-) True AMCG00016294
AMCG00016293 mRNA downstream 625978 14785198 ~ 14791045 (-) True AMCG00016293
AMCG00016310 mRNA upstream 139351 15556869 ~ 15564100 (-) True AMCG00016310
AMCG00016308 mRNA upstream 159915 15577433 ~ 15596800 (-) True AMCG00016308
AMCG00016309 mRNA upstream 203538 15621056 ~ 15624452 (-) True AMCG00016309
AMCG00016316 mRNA upstream 317578 15735096 ~ 15740346 (-) True AMCG00016316
AMCG00016317 mRNA upstream 324923 15742441 ~ 15758023 (-) True AMCG00016317
TU15638 other downstream 625054 14790203 ~ 14791969 (-) False AMCG00016293
TU15220 other downstream 1857839 13554585 ~ 13559184 (-) False AMCG00016246
TU15028 other downstream 2546463 12862099 ~ 12870560 (-) False AMCG00016226
TU16024 other upstream 1441023 16858541 ~ 16861179 (-) True G12945
TU16025 other upstream 1441023 16858541 ~ 16861179 (-) False G12945
TU16027 other upstream 1441023 16858541 ~ 16861179 (-) False G12945
TU16556 other upstream 3673721 19091239 ~ 19105381 (-) True G13367
TU16905 other upstream 4717679 20135197 ~ 20135547 (-) False AMCG00016453

Expression Profile