RNA id: TU17202



Basic Information


Item Value
RNA id TU17202
length 233
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G13884
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22141953 ~ 22142185 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCTTCGCTCCctacgtgcatcaatgagccttggccgcccatgaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttatgcttgcccatttttcctgcttctaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU17179 lncRNA downstream 356237 21785244 ~ 21785716 (-) True G13861
TU17178 lncRNA downstream 359657 21782064 ~ 21782296 (-) True G13860
TU17121 lncRNA downstream 1233835 20907918 ~ 20908118 (-) True G13819
TU17114 lncRNA downstream 1380260 20761423 ~ 20761693 (-) True G13812
TU17110 lncRNA downstream 1474973 20666142 ~ 20666980 (-) False AMCG00016480
TU17205 lncRNA upstream 30365 22172550 ~ 22172940 (-) True G13887
TU17211 lncRNA upstream 47731 22189916 ~ 22226828 (-) True G13891
TU17214 lncRNA upstream 93986 22236171 ~ 22236399 (-) True G13893
TU17216 lncRNA upstream 218329 22360514 ~ 22360776 (-) True G13895
TU17218 lncRNA upstream 229780 22371965 ~ 22372310 (-) True G13897
AMCG00016497 mRNA downstream 56611 22077617 ~ 22085342 (-) True AMCG00016497
AMCG00016487 mRNA downstream 121222 22017124 ~ 22020731 (-) True AMCG00016487
AMCG00016488 mRNA downstream 189760 21949268 ~ 21952193 (-) True AMCG00016488
AMCG00016486 mRNA downstream 220314 21910870 ~ 21921639 (-) True AMCG00016486
AMCG00016485 mRNA downstream 432264 21688811 ~ 21709689 (-) True AMCG00016485
AMCG00016504 mRNA upstream 1698877 23841062 ~ 23862739 (-) True AMCG00016504
AMCG00016505 mRNA upstream 1722396 23864581 ~ 23885258 (-) False AMCG00016505
AMCG00016512 mRNA upstream 1751238 23893423 ~ 23902805 (-) True AMCG00016512
AMCG00016510 mRNA upstream 1774758 23916943 ~ 23925716 (-) True AMCG00016510
AMCG00016514 mRNA upstream 1785706 23927891 ~ 23931580 (-) True AMCG00016514
TU16905 other downstream 2006406 20135197 ~ 20135547 (-) False AMCG00016453
TU16556 other downstream 3036572 19091239 ~ 19105381 (-) True G13367
TU16024 other downstream 5280774 16858541 ~ 16861179 (-) True G12945
TU17287 other upstream 1312907 23455092 ~ 23455811 (-) True G13962
TU17295 other upstream 1556964 23699149 ~ 23700255 (-) True G13969
TU17551 other upstream 2168852 24311037 ~ 24316802 (-) False AMCG00016531
TU17553 other upstream 2168852 24311037 ~ 24316802 (-) False AMCG00016531
TU17725 other upstream 2738963 24881148 ~ 24882098 (-) True G14305

Expression Profile