RNA id: TU17453


Basic Information

Item Value
RNA id TU17453
length 279
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G14092
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24147399 ~ 24147677 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cctctcacacacactctccttctctctctctttccacccAGGCCTTTCCCTCTTCCAAAAGCAGATGGAAtgtaaagcaacaaaacaaaataaaaaagataaaaaaaaaaaaaaaaaacactttccagGGGGAGACCGATCgtatttattcaattaccaGGGCTGTcaagatgcctttatccagaGGGGTGTGGGACAATGCGCAGTGTAGCTTCGGAGGGGGGAAGAAAGAGCAGAGGTATTCAACAAAGGGGCATTATTAAGTGACTTCTCCTTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17361 lncRNA downstream 204021 23942044 ~ 23943378 (-) True G14016
TU17360 lncRNA downstream 205861 23941318 ~ 23941538 (-) True G14015
TU17358 lncRNA downstream 212932 23934166 ~ 23934467 (-) True G14013
TU17356 lncRNA downstream 213556 23933009 ~ 23933843 (-) True G14012
TU17328 lncRNA downstream 264440 23880959 ~ 23882959 (-) True G13990
TU17454 lncRNA upstream 17480 24165157 ~ 24165420 (-) True G14093
TU17560 lncRNA upstream 188267 24335944 ~ 24336827 (-) True G14171
TU17574 lncRNA upstream 277487 24425164 ~ 24425498 (-) True G14181
TU17593 lncRNA upstream 406015 24553692 ~ 24566678 (-) True AMCG00016538
TU17594 lncRNA upstream 406015 24553692 ~ 24566678 (-) False AMCG00016538
AMCG00016522 mRNA downstream 5785 24123436 ~ 24141614 (-) True AMCG00016522
AMCG00016521 mRNA downstream 54799 24073442 ~ 24092600 (-) True AMCG00016521
AMCG00016524 mRNA downstream 79396 24063267 ~ 24068003 (-) True AMCG00016524
AMCG00016523 mRNA downstream 84797 24047820 ~ 24062602 (-) True AMCG00016523
AMCG00016517 mRNA downstream 107599 24029390 ~ 24039800 (-) True AMCG00016517
AMCG00016525 mRNA upstream 50208 24197885 ~ 24213659 (-) True AMCG00016525
AMCG00016526 mRNA upstream 68270 24215947 ~ 24243375 (-) True AMCG00016526
AMCG00016528 mRNA upstream 99505 24247182 ~ 24249577 (-) True AMCG00016528
AMCG00016527 mRNA upstream 102440 24250117 ~ 24270251 (-) True AMCG00016527
AMCG00016533 mRNA upstream 143017 24290694 ~ 24304314 (-) True AMCG00016533
TU17295 other downstream 447144 23699149 ~ 23700255 (-) True G13969
TU17287 other downstream 691588 23455092 ~ 23455811 (-) True G13962
TU16905 other downstream 4011852 20135197 ~ 20135547 (-) False AMCG00016453
TU16556 other downstream 5042018 19091239 ~ 19105381 (-) True G13367
TU16027 other downstream 7286220 16858541 ~ 16861179 (-) False G12945
TU17551 other upstream 163360 24311037 ~ 24316802 (-) False AMCG00016531
TU17553 other upstream 163360 24311037 ~ 24316802 (-) False AMCG00016531
TU17725 other upstream 733471 24881148 ~ 24882098 (-) True G14305
TU17766 other upstream 863664 25011341 ~ 25011778 (-) False AMCG00016562
TU17768 other upstream 864687 25012364 ~ 25015343 (-) False AMCG00016562

Expression Profile