RNA id: TU18283


Basic Information

Item Value
RNA id TU18283
length 706
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G14723
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26275177 ~ 26303459 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

NNNATCTCGGCTCCTcgagactttttatttttcttcccaatTTCTAATTTTGTATGGTTTATAAGGCTGCCAATGAATGTGCAATCCTGAATGCTTCTCTGCGGCCGGTCTGTCCCGATACATTTACCTACACTTATACCTTGTACCTGTATATGCgtcataataatgatgatgataactaATACTCATGTCAGATTACACTGTTTTACTTCCAAACCACTAACTGATCAGAGGCTTAAGTTCTTGCAGAGTTTCAGCACTTCCCCCCCGTCCTTGTTGATTATTGGGTTTGGGGGGCTTCTCTGTGCACATTCTCTGTGGGGGCGATTACTTTCGAGCAGTGCTTGTTTTACTCTGGGGTTTTATAGATTCCTATTGGGTTAGACGCTTGTGTGAGAGGAGCAGTTGGTGTCAGGGACAGTGAGTTCTGTGTTTGCTGGGGGGGCATGTGTCAggaataacagaacaaaaataaaaccacaattttaaatacaatcccGTCGACAAGATTTGTAAACGATTGAACGTGGTGCTGCAGAACGCCACCTAGCGGGGGGGGTCCGCTTCCTGACGAGAGCTGGTGCTTTGCCTGTCTCTGATCTCTCTCTTCAATATCTCCAGCCAGGAAACAGCTGCCTGCTCGCTCCCACAGCCACCTGTAACCCGCTGGAGCCGCACAGGAGAGATGTGGAGGGGGGGACGGGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18227 lncRNA downstream 90399 26181744 ~ 26184778 (-) False G14676
TU18228 lncRNA downstream 90399 26181744 ~ 26184778 (-) False G14676
TU18219 lncRNA downstream 126093 26148305 ~ 26149084 (-) False AMCG00016617
TU18197 lncRNA downstream 176205 26097728 ~ 26098972 (-) True G14650
TU18115 lncRNA downstream 252914 25971786 ~ 26022263 (-) True G14585
TU18337 lncRNA upstream 91473 26394932 ~ 26395425 (-) True G14765
TU18347 lncRNA upstream 121573 26425032 ~ 26425250 (-) True G14775
TU18409 lncRNA upstream 123880 26427339 ~ 26518279 (-) False G14816
TU18415 lncRNA upstream 126996 26430455 ~ 26432353 (-) False G14818
TU18418 lncRNA upstream 126996 26430455 ~ 26468099 (-) True G14818
AMCG00016623 mRNA downstream 33787 26239082 ~ 26241390 (-) True AMCG00016623
AMCG00016624 mRNA downstream 60117 26212386 ~ 26215060 (-) True AMCG00016624
AMCG00016616 mRNA downstream 115255 26159026 ~ 26159922 (-) False AMCG00016616
AMCG00016615 mRNA downstream 119727 26151611 ~ 26155450 (-) True AMCG00016615
AMCG00016617 mRNA downstream 125634 26147510 ~ 26149543 (-) True AMCG00016617
AMCG00016629 mRNA upstream 1456 26304915 ~ 26309363 (-) True AMCG00016629
AMCG00016628 mRNA upstream 36034 26339493 ~ 26343614 (-) True AMCG00016628
AMCG00016627 mRNA upstream 69560 26373019 ~ 26374602 (-) True AMCG00016627
AMCG00016630 mRNA upstream 76589 26380048 ~ 26381729 (-) True AMCG00016630
AMCG00016634 mRNA upstream 138700 26442159 ~ 26446820 (-) True AMCG00016634
TU18278 other downstream 34071 26239082 ~ 26241106 (-) False AMCG00016623
TU18225 other downstream 90399 26181744 ~ 26184778 (-) False G14676
TU18226 other downstream 90399 26181744 ~ 26184778 (-) True G14676
TU18222 other downstream 115735 26156521 ~ 26159442 (-) True AMCG00016616
TU18183 other downstream 192010 26081503 ~ 26083167 (-) True G14637
TU18405 other upstream 123880 26427339 ~ 26518279 (-) False G14816
TU18407 other upstream 123880 26427339 ~ 26520397 (-) True G14816
TU18445 other upstream 265210 26568669 ~ 26571641 (-) True G14843
TU18448 other upstream 265210 26568669 ~ 26571641 (-) False G14843
TU18636 other upstream 965361 27268820 ~ 27279334 (-) True AMCG00016671

Expression Profile