RNA id: TU18390



Basic Information


Item Value
RNA id TU18390
length 510
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G14802
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26712231 ~ 26713129 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGGAAGGCATCGCTTGATTCTCAGATCCGTAAGTGATCCTAGAATGCTCTGTATCCAGAGAGGGGGTCACGCTGTCTGCACTCAGGGAGGAAATCCAGGCTGATTTCAGTGCATCACATGTGAAGAAGGCGCTGAGCCCCGGTTATAAATAGGGCTCCTGTTTGCGTGTTTTTGAAAGTGGAATGTGAAGTGAAACTCTATTTTTCTCGACACGGTTTGGCGACTTGTGCGGCATGACACCAGGTTCGAAaacctccccccctcctccctcccttctcccACCACAGACTGAtcaatcccccccaccacctttGGGCTGTTTGTGAGTAAACATCTGTGGATCGGCATGGTGTTTTATAAGTGGGTTCTGGCACTCAAAACCCCCCCTGCGATCTGGTTGCTGTGGCTCATTTGCCATCTTGGAGGAAATTCCTCGACTCCTCGGCTCTAGGTGAGGGGAGGTGGCGGGGGTATCCCGGGCTGAAGATCTTGCACTGCgaagaacaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU18388 lncRNA upstream 7027 26704997 ~ 26705204 (+) True G14800
TU18377 lncRNA upstream 54913 26589606 ~ 26657318 (+) False G14791
TU18381 lncRNA upstream 79039 26626707 ~ 26633192 (+) True G14793
TU18375 lncRNA upstream 115374 26589606 ~ 26596857 (+) True G14791
TU18364 lncRNA upstream 164019 26527319 ~ 26548212 (+) True AMCG00016638
TU18391 lncRNA downstream 2440 26715569 ~ 26715801 (+) True G14803
TU18559 lncRNA downstream 253168 26966297 ~ 26993948 (+) True AMCG00016663
TU18626 lncRNA downstream 549761 27262890 ~ 27274297 (+) True G14992
TU18644 lncRNA downstream 568295 27281424 ~ 27282569 (+) True G15005
TU18672 lncRNA downstream 656460 27369589 ~ 27370138 (+) True G15025
AMCG00016647 mRNA upstream 12030 26683642 ~ 26700201 (+) True AMCG00016647
AMCG00016636 mRNA upstream 44551 26665445 ~ 26667680 (+) True AMCG00016636
AMCG00016635 mRNA upstream 100837 26600093 ~ 26611394 (+) True AMCG00016635
AMCG00016646 mRNA upstream 128565 26583454 ~ 26583666 (+) True AMCG00016646
AMCG00016637 mRNA upstream 139874 26559807 ~ 26572357 (+) True AMCG00016637
AMCG00016650 mRNA downstream 144589 26857718 ~ 26869181 (+) True AMCG00016650
AMCG00016654 mRNA downstream 180150 26893279 ~ 26897534 (+) True AMCG00016654
AMCG00016655 mRNA downstream 198839 26911968 ~ 26918768 (+) True AMCG00016655
AMCG00016661 mRNA downstream 264066 26977195 ~ 26990313 (+) True AMCG00016661
AMCG00016663 mRNA downstream 277915 26991044 ~ 26992935 (+) False AMCG00016663
TU18379 other upstream 54806 26605526 ~ 26657425 (+) False AMCG00016635
TU18348 other upstream 279875 26427339 ~ 26432356 (+) True AMCG00016633
TU18353 other upstream 282904 26428723 ~ 26429327 (+) False AMCG00016633
TU18257 other upstream 423009 26285863 ~ 26289222 (+) False AMCG00016625
TU18064 other upstream 762055 25940528 ~ 25950176 (+) False AMCG00016607
TU18699 other downstream 832865 27545994 ~ 27547609 (+) False AMCG00016683
TU18716 other downstream 875350 27588479 ~ 27599592 (+) False AMCG00016691
TU18717 other downstream 875350 27588479 ~ 27598648 (+) False AMCG00016691
TU18724 other downstream 899976 27613105 ~ 27619919 (+) False AMCG00016690
TU18835 other downstream 1116139 27829268 ~ 27831694 (+) True AMCG00016705

Expression Profile