RNA id: TU18391


Basic Information

Item Value
RNA id TU18391
length 233
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G14803
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26715569 ~ 26715801 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cttgatctggccaactgttgtgaagatgtttttcttcaccagggaaataattcctctgtcatccaccacagttgttgtccgtggtcttccgggccttttggtgttcctgagctcaccagtgcgttctttctttttaagaatgtaccaaatagttgatctggccacacctaatgattttgctatctctctgattggtttggcaaaggcaaaggcaaaactccacaagaacaagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18390 lncRNA upstream 2440 26712231 ~ 26713129 (+) True G14802
TU18388 lncRNA upstream 10365 26704997 ~ 26705204 (+) True G14800
TU18377 lncRNA upstream 58251 26589606 ~ 26657318 (+) False G14791
TU18381 lncRNA upstream 82377 26626707 ~ 26633192 (+) True G14793
TU18375 lncRNA upstream 118712 26589606 ~ 26596857 (+) True G14791
TU18559 lncRNA downstream 250496 26966297 ~ 26993948 (+) True AMCG00016663
TU18626 lncRNA downstream 547089 27262890 ~ 27274297 (+) True G14992
TU18644 lncRNA downstream 565623 27281424 ~ 27282569 (+) True G15005
TU18672 lncRNA downstream 653788 27369589 ~ 27370138 (+) True G15025
TU18707 lncRNA downstream 826687 27542488 ~ 27544996 (+) False AMCG00016683
AMCG00016647 mRNA upstream 15368 26683642 ~ 26700201 (+) True AMCG00016647
AMCG00016636 mRNA upstream 47889 26665445 ~ 26667680 (+) True AMCG00016636
AMCG00016635 mRNA upstream 104175 26600093 ~ 26611394 (+) True AMCG00016635
AMCG00016646 mRNA upstream 131903 26583454 ~ 26583666 (+) True AMCG00016646
AMCG00016637 mRNA upstream 143212 26559807 ~ 26572357 (+) True AMCG00016637
AMCG00016650 mRNA downstream 141917 26857718 ~ 26869181 (+) True AMCG00016650
AMCG00016654 mRNA downstream 177478 26893279 ~ 26897534 (+) True AMCG00016654
AMCG00016655 mRNA downstream 196167 26911968 ~ 26918768 (+) True AMCG00016655
AMCG00016661 mRNA downstream 261394 26977195 ~ 26990313 (+) True AMCG00016661
AMCG00016663 mRNA downstream 275243 26991044 ~ 26992935 (+) False AMCG00016663
TU18379 other upstream 58144 26605526 ~ 26657425 (+) False AMCG00016635
TU18348 other upstream 283213 26427339 ~ 26432356 (+) True AMCG00016633
TU18353 other upstream 286242 26428723 ~ 26429327 (+) False AMCG00016633
TU18257 other upstream 426347 26285863 ~ 26289222 (+) False AMCG00016625
TU18064 other upstream 765393 25940528 ~ 25950176 (+) False AMCG00016607
TU18699 other downstream 830193 27545994 ~ 27547609 (+) False AMCG00016683
TU18716 other downstream 872678 27588479 ~ 27599592 (+) False AMCG00016691
TU18717 other downstream 872678 27588479 ~ 27598648 (+) False AMCG00016691
TU18724 other downstream 897304 27613105 ~ 27619919 (+) False AMCG00016690
TU18835 other downstream 1113467 27829268 ~ 27831694 (+) True AMCG00016705

Expression Profile