RNA id: TU18742


Basic Information

Item Value
RNA id TU18742
length 230
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G15071
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27413000 ~ 27413229 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttcaaaacagcatcaattcttctagatacactttcacaaagtcagggattttgtaggcatatagtcaggtgtatgattaaacaacaggtgctaatgatcatcaattcaatatgtaggttgaaacacaatcattaactgaaacagaaacagctgtgtaggaggaataaaactgggtgaggaacagccaaactcagctaacaaggtgaggctgctgaagacagtttactgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18737 lncRNA downstream 14417 27395119 ~ 27398583 (-) True G15066
TU18659 lncRNA downstream 104042 27296085 ~ 27308958 (-) True G15016
TU18640 lncRNA downstream 147397 27263713 ~ 27265603 (-) True G15001
TU18637 lncRNA downstream 167753 27243966 ~ 27245247 (-) True G14999
TU18574 lncRNA downstream 409293 26995173 ~ 27003707 (-) False AMCG00016662
TU18744 lncRNA upstream 2424 27415653 ~ 27415892 (-) True G15073
TU18745 lncRNA upstream 3020 27416249 ~ 27416539 (-) True G15074
TU18746 lncRNA upstream 11325 27424554 ~ 27424821 (-) True G15075
TU18755 lncRNA upstream 122096 27535325 ~ 27541840 (-) True G15079
TU18775 lncRNA upstream 137083 27550312 ~ 27553162 (-) True G15095
AMCG00016675 mRNA downstream 31912 27375965 ~ 27381088 (-) True AMCG00016675
AMCG00016670 mRNA downstream 37300 27370979 ~ 27375700 (-) True AMCG00016670
AMCG00016669 mRNA downstream 73407 27338007 ~ 27339593 (-) True AMCG00016669
AMCG00016672 mRNA downstream 99827 27299603 ~ 27313173 (-) True AMCG00016672
AMCG00016673 mRNA downstream 122139 27286874 ~ 27290861 (-) True AMCG00016673
AMCG00016681 mRNA upstream 16873 27430102 ~ 27433860 (-) True AMCG00016681
AMCG00016688 mRNA upstream 96416 27509645 ~ 27516973 (-) True AMCG00016688
AMCG00016692 mRNA upstream 230410 27643639 ~ 27650849 (-) True AMCG00016692
AMCG00016693 mRNA upstream 242519 27655748 ~ 27669412 (-) True AMCG00016693
AMCG00016694 mRNA upstream 287783 27701012 ~ 27707529 (-) True AMCG00016694
TU18738 other downstream 9078 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 42861 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 133666 27268820 ~ 27279334 (-) True AMCG00016671
TU18445 other downstream 841359 26568669 ~ 26571641 (-) True G14843
TU18448 other downstream 841359 26568669 ~ 26571641 (-) False G14843
TU18749 other upstream 11664 27424893 ~ 27428651 (-) True G15076
TU19143 other upstream 1368243 28781472 ~ 28785507 (-) True AMCG00016732
TU19522 other upstream 2788230 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 3113063 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 5009829 32423058 ~ 32423438 (-) True G16247

Expression Profile