RNA id: TU18849



Basic Information


Item Value
RNA id TU18849
length 226
lncRNA type inter_gene
GC content 0.67
exon number 1
gene id G15166
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27796783 ~ 27797008 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGGGGTTTACAGACCAGCAACTGGGAAGAGACGAGTGTGGCCGATCATCAGTCATGCAATAACGAGCTGCGGCCGTACCTGCTGGGCTGGTGGCCGGCGGCCTGCTCGGtgtccacagagagagaggccatGGCGCTGACCGTCTCGGCCTCCTCGGTCTCCCGGCGCTGCGCCTCCAGCAGGGACAGGGCCACGGTGGGGGCGAACCTCTGCACCGAGCTCCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU18848 lncRNA downstream 1803 27794592 ~ 27794980 (-) True G15165
TU18775 lncRNA downstream 243621 27550312 ~ 27553162 (-) True G15095
TU18755 lncRNA downstream 254943 27535325 ~ 27541840 (-) True G15079
TU18746 lncRNA downstream 371962 27424554 ~ 27424821 (-) True G15075
TU18745 lncRNA downstream 380244 27416249 ~ 27416539 (-) True G15074
TU18858 lncRNA upstream 5121 27802129 ~ 27805042 (-) True G15172
TU18854 lncRNA upstream 13630 27810638 ~ 27815464 (-) True G15169
TU18892 lncRNA upstream 86631 27883639 ~ 27884430 (-) True G15200
TU18893 lncRNA upstream 88078 27885086 ~ 27886560 (-) True G15201
TU18895 lncRNA upstream 88954 27885962 ~ 27886560 (-) False G15201
AMCG00016695 mRNA downstream 58354 27732315 ~ 27738429 (-) True AMCG00016695
AMCG00016694 mRNA downstream 89254 27701012 ~ 27707529 (-) True AMCG00016694
AMCG00016693 mRNA downstream 127371 27655748 ~ 27669412 (-) True AMCG00016693
AMCG00016692 mRNA downstream 145934 27643639 ~ 27650849 (-) True AMCG00016692
AMCG00016688 mRNA downstream 279810 27509645 ~ 27516973 (-) True AMCG00016688
AMCG00016700 mRNA upstream 9341 27806349 ~ 27809112 (-) True AMCG00016700
AMCG00016701 mRNA upstream 43187 27840195 ~ 27842668 (-) True AMCG00016701
AMCG00016709 mRNA upstream 194639 27991647 ~ 27997674 (-) True AMCG00016709
AMCG00016713 mRNA upstream 295236 28092244 ~ 28107936 (-) True AMCG00016713
AMCG00016712 mRNA upstream 333046 28130054 ~ 28146016 (-) True AMCG00016712
TU18749 other downstream 368132 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 392861 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 426644 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 517449 27268820 ~ 27279334 (-) True AMCG00016671
TU18448 other downstream 1225142 26568669 ~ 26571641 (-) False G14843
TU19143 other upstream 984464 28781472 ~ 28785507 (-) True AMCG00016732
TU19522 other upstream 2404451 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 2729284 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 4626050 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 4700499 32497507 ~ 32503252 (-) True AMCG00016859