Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU18926 |
| length | 273 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G15224 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 28116918 ~ 28117190 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0006631 | fatty acid metabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18886 | lncRNA | upstream | 124126 | 27992588 ~ 27992792 (+) | False | AMCG00016707 |
| TU18885 | lncRNA | upstream | 124636 | 27992062 ~ 27992282 (+) | False | AMCG00016707 |
| TU18859 | lncRNA | upstream | 277815 | 27836513 ~ 27839103 (+) | True | AMCG00016706 |
| TU18827 | lncRNA | upstream | 317803 | 27797549 ~ 27799115 (+) | False | AMCG00016699 |
| TU18718 | lncRNA | upstream | 512043 | 27599810 ~ 27604875 (+) | False | AMCG00016691 |
| TU18928 | lncRNA | downstream | 1353 | 28118543 ~ 28119649 (+) | True | G15226 |
| TU18958 | lncRNA | downstream | 43475 | 28160665 ~ 28160887 (+) | True | G15253 |
| TU18980 | lncRNA | downstream | 108652 | 28225842 ~ 28230979 (+) | True | G15270 |
| TU19065 | lncRNA | downstream | 317794 | 28434984 ~ 28435256 (+) | True | G15328 |
| TU19066 | lncRNA | downstream | 334114 | 28451304 ~ 28451616 (+) | True | G15329 |
| AMCG00016711 | mRNA | upstream | 26738 | 28073595 ~ 28090180 (+) | True | AMCG00016711 |
| AMCG00016708 | mRNA | upstream | 65887 | 28040024 ~ 28051031 (+) | True | AMCG00016708 |
| AMCG00016710 | mRNA | upstream | 88644 | 28006284 ~ 28028274 (+) | True | AMCG00016710 |
| AMCG00016707 | mRNA | upstream | 118141 | 27964578 ~ 27998777 (+) | True | AMCG00016707 |
| AMCG00016704 | mRNA | upstream | 228706 | 27881440 ~ 27888212 (+) | True | AMCG00016704 |
| AMCG00016720 | mRNA | downstream | 37572 | 28154762 ~ 28181038 (+) | True | AMCG00016720 |
| AMCG00016722 | mRNA | downstream | 163308 | 28280498 ~ 28286427 (+) | True | AMCG00016722 |
| AMCG00016721 | mRNA | downstream | 191412 | 28308602 ~ 28345826 (+) | True | AMCG00016721 |
| AMCG00016728 | mRNA | downstream | 541742 | 28658932 ~ 28660893 (+) | True | AMCG00016728 |
| AMCG00016729 | mRNA | downstream | 547624 | 28664814 ~ 28681501 (+) | True | AMCG00016729 |
| TU18924 | other | upstream | 11207 | 28104737 ~ 28105711 (+) | True | G15223 |
| TU18876 | other | upstream | 238221 | 27872663 ~ 27878697 (+) | True | AMCG00016702 |
| TU18835 | other | upstream | 285224 | 27829268 ~ 27831694 (+) | True | AMCG00016705 |
| TU18724 | other | upstream | 496999 | 27613105 ~ 27619919 (+) | False | AMCG00016690 |
| TU18716 | other | upstream | 517326 | 27588479 ~ 27599592 (+) | False | AMCG00016691 |
| TU19419 | other | downstream | 1955748 | 30072938 ~ 30074896 (+) | False | AMCG00016772 |
| TU19422 | other | downstream | 1964064 | 30081254 ~ 30083528 (+) | False | AMCG00016772 |
| TU19434 | other | downstream | 1992409 | 30109599 ~ 30113284 (+) | True | AMCG00016770 |
| TU19453 | other | downstream | 2119264 | 30236454 ~ 30236841 (+) | True | G15659 |
| TU19688 | other | downstream | 2942150 | 31059340 ~ 31061145 (+) | True | G15855 |
