RNA id: TU19205


Basic Information

Item Value
RNA id TU19205
length 225
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G15448
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 29066111 ~ 29066388 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gatctgcgctgtattagggatatagaagaattggtcaatcagcccatgagagagatggtgtgcacgccaaaacctaggagagttgagaccttagagcaggacagtgtagagaactgctgggttacagtaggtcgtaaccgcagaaaagggcgtgcacaacccctagagacaccccaagagctcagagggtgatgggggggcagttgagcaccagagcaccatggt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19116 lncRNA downstream 370191 28695698 ~ 28695920 (-) True G15365
TU19115 lncRNA downstream 383773 28681838 ~ 28682338 (-) True G15364
TU19067 lncRNA downstream 614479 28451398 ~ 28451632 (-) True G15330
TU19002 lncRNA downstream 779666 28284362 ~ 28286445 (-) True G15291
TU18959 lncRNA downstream 905171 28160687 ~ 28160940 (-) True G15254
TU19222 lncRNA upstream 135516 29201904 ~ 29208644 (-) False AMCG00016740
TU19300 lncRNA upstream 194924 29261312 ~ 29264667 (-) True G15525
TU19365 lncRNA upstream 736507 29802895 ~ 29807133 (-) True G15585
TU19476 lncRNA upstream 972402 30038790 ~ 30041875 (-) True G15673
TU19477 lncRNA upstream 973407 30039795 ~ 30041875 (-) False G15673
AMCG00016738 mRNA downstream 41593 29021627 ~ 29024518 (-) True AMCG00016738
AMCG00016736 mRNA downstream 112315 28949450 ~ 28953796 (-) True AMCG00016736
AMCG00016732 mRNA downstream 280612 28781477 ~ 28785499 (-) False AMCG00016732
AMCG00016733 mRNA downstream 327508 28725609 ~ 28738603 (-) True AMCG00016733
AMCG00016727 mRNA downstream 547363 28509826 ~ 28518748 (-) True AMCG00016727
AMCG00016741 mRNA upstream 125346 29191734 ~ 29201720 (-) True AMCG00016741
AMCG00016740 mRNA upstream 135484 29201872 ~ 29225587 (-) True AMCG00016740
AMCG00016743 mRNA upstream 199371 29265759 ~ 29288483 (-) True AMCG00016743
AMCG00016742 mRNA upstream 247000 29313388 ~ 29322785 (-) True AMCG00016742
AMCG00016744 mRNA upstream 289804 29356192 ~ 29362007 (-) True AMCG00016744
TU19143 other downstream 280604 28781472 ~ 28785507 (-) True AMCG00016732
TU18749 other downstream 1637460 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 1662189 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 1695972 27369590 ~ 27370139 (-) True G15026
TU18636 other downstream 1786777 27268820 ~ 27279334 (-) True AMCG00016671
TU19522 other upstream 1135071 30201459 ~ 30202351 (-) True G15706
TU19613 other upstream 1459904 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 3356670 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 3431119 32497507 ~ 32503252 (-) True AMCG00016859
TU20192 other upstream 3431119 32497507 ~ 32498895 (-) False AMCG00016859

Expression Profile