RNA id: TU19524


Basic Information

Item Value
RNA id TU19524
length 294
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G15708
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30204822 ~ 30205115 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

taactgagcagattgtgaaatactcagaccggcccatctggcaccaacaaccattacacgctcaaaattgcttaaatcacctttctttcccattcagacgttcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaagttgaacaggtgttcctaataatcctttaagtgagtgtatAGCCATTACTATTTAATTTTGGAGATTAAGCAGGATTTGCAGAGTGGCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19499 lncRNA downstream 91538 30109453 ~ 30113284 (-) True G15690
TU19480 lncRNA downstream 160257 30042575 ~ 30044565 (-) True G15675
TU19476 lncRNA downstream 162947 30038790 ~ 30041875 (-) True G15673
TU19477 lncRNA downstream 162947 30039795 ~ 30041875 (-) False G15673
TU19365 lncRNA downstream 397689 29802895 ~ 29807133 (-) True G15585
TU19527 lncRNA upstream 2572 30207687 ~ 30208537 (-) True G15711
TU19535 lncRNA upstream 28433 30233548 ~ 30236867 (-) True G15716
TU19567 lncRNA upstream 224814 30429929 ~ 30431998 (-) True G15746
TU19678 lncRNA upstream 793519 30998634 ~ 31002128 (-) True G15845
TU19687 lncRNA upstream 827955 31033070 ~ 31033320 (-) True G15854
AMCG00016775 mRNA downstream 30534 30161793 ~ 30174288 (-) True AMCG00016775
AMCG00016773 mRNA downstream 65131 30123851 ~ 30139691 (-) True AMCG00016773
AMCG00016774 mRNA downstream 105215 30088847 ~ 30099607 (-) True AMCG00016774
AMCG00016765 mRNA downstream 133598 30067321 ~ 30071224 (-) True AMCG00016765
AMCG00016768 mRNA downstream 168780 30019515 ~ 30036042 (-) True AMCG00016768
AMCG00016779 mRNA upstream 11129 30216244 ~ 30223409 (-) True AMCG00016779
AMCG00016780 mRNA upstream 31859 30236974 ~ 30241569 (-) True AMCG00016780
AMCG00016794 mRNA upstream 260042 30465157 ~ 30467804 (-) True AMCG00016794
AMCG00016792 mRNA upstream 346013 30551128 ~ 30557792 (-) True AMCG00016792
AMCG00016793 mRNA upstream 353141 30558256 ~ 30563594 (-) True AMCG00016793
TU19522 other downstream 2471 30201459 ~ 30202351 (-) True G15706
TU19143 other downstream 1419315 28781472 ~ 28785507 (-) True AMCG00016732
TU18749 other downstream 2776171 27424893 ~ 27428651 (-) True G15076
TU18738 other downstream 2800900 27401676 ~ 27403922 (-) True G15067
TU18673 other downstream 2834683 27369590 ~ 27370139 (-) True G15026
TU19613 other upstream 321177 30526292 ~ 30529500 (-) True G15787
TU20184 other upstream 2217943 32423058 ~ 32423438 (-) True G16247
TU20188 other upstream 2292392 32497507 ~ 32503252 (-) True AMCG00016859
TU20192 other upstream 2292392 32497507 ~ 32498895 (-) False AMCG00016859
TU20326 other upstream 2970961 33176076 ~ 33178883 (-) True G16356

Expression Profile