RNA id: TU20865



Basic Information


Item Value
RNA id TU20865
length 204
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G16804
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35362123 ~ 35362326 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cgtgtgtccctgctgctctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU20851 lncRNA downstream 91584 35270117 ~ 35270539 (-) True G16790
TU20819 lncRNA downstream 139585 35216103 ~ 35222538 (-) True G16761
TU20752 lncRNA downstream 243217 35116112 ~ 35118906 (-) True G16712
TU20726 lncRNA downstream 585075 34775825 ~ 34777048 (-) True G16693
TU20712 lncRNA downstream 605118 34754171 ~ 34757005 (-) True G16679
TU20874 lncRNA upstream 33676 35396002 ~ 35398897 (-) False AMCG00016938
TU20925 lncRNA upstream 322377 35684703 ~ 35733304 (-) True G16858
TU20963 lncRNA upstream 480604 35842930 ~ 35912085 (-) True G16893
TU21000 lncRNA upstream 989627 36351953 ~ 36352178 (-) True G16927
TU21058 lncRNA upstream 1346825 36709151 ~ 36709355 (-) True G16979
AMCG00016937 mRNA downstream 49410 35273923 ~ 35312713 (-) True AMCG00016937
AMCG00016936 mRNA downstream 116472 35235592 ~ 35245651 (-) True AMCG00016936
AMCG00016931 mRNA downstream 265621 35091453 ~ 35096502 (-) True AMCG00016931
AMCG00016911 mRNA downstream 1099113 34214899 ~ 34263010 (-) True AMCG00016911
AMCG00016908 mRNA downstream 1353323 34000597 ~ 34008800 (-) True AMCG00016908
AMCG00016938 mRNA upstream 33666 35395992 ~ 35399030 (-) True AMCG00016938
AMCG00016940 mRNA upstream 42304 35404630 ~ 35410252 (-) True AMCG00016940
AMCG00016939 mRNA upstream 49253 35411579 ~ 35420041 (-) True AMCG00016939
AMCG00016942 mRNA upstream 94871 35457197 ~ 35484896 (-) True AMCG00016942
AMCG00016944 mRNA upstream 362207 35724533 ~ 35725033 (-) True AMCG00016944
TU20574 other downstream 1254182 34106690 ~ 34107941 (-) True G16563
TU20442 other downstream 1848544 33488725 ~ 33513579 (-) False AMCG00016891
TU20415 other downstream 1931038 33426488 ~ 33431085 (-) False AMCG00016889
TU20326 other downstream 2183240 33176076 ~ 33178883 (-) True G16356
TU20192 other downstream 2863228 32497507 ~ 32498895 (-) False AMCG00016859
TU21119 other upstream 2395831 37758157 ~ 37758471 (-) True G17032
TU21144 other upstream 2665157 38027483 ~ 38058939 (-) False AMCG00016959
TU21143 other upstream 2692339 38054665 ~ 38058939 (-) False AMCG00016959
TU21619 other upstream 5854325 41216651 ~ 41217231 (-) True G17421
TU22128 other upstream 7446385 42808711 ~ 42864616 (-) True G17842

Expression Profile