Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU20933 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G16863 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 35898207 ~ 35898516 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20876 | lncRNA | upstream | 449036 | 35399828 ~ 35449171 (+) | True | G16814 |
| TU20867 | lncRNA | upstream | 516424 | 35381497 ~ 35381783 (+) | True | G16806 |
| TU20848 | lncRNA | upstream | 546287 | 35351577 ~ 35351920 (+) | True | G16788 |
| TU20844 | lncRNA | upstream | 591482 | 35306489 ~ 35306725 (+) | True | G16784 |
| TU20839 | lncRNA | upstream | 615447 | 35282171 ~ 35282760 (+) | True | G16779 |
| TU21047 | lncRNA | downstream | 782823 | 36681339 ~ 36681552 (+) | True | G16969 |
| TU21063 | lncRNA | downstream | 1074548 | 36973064 ~ 36973283 (+) | True | G16984 |
| TU21071 | lncRNA | downstream | 1348912 | 37247428 ~ 37303443 (+) | True | G16990 |
| TU21081 | lncRNA | downstream | 1515598 | 37414114 ~ 37418490 (+) | True | G16998 |
| TU21083 | lncRNA | downstream | 1515598 | 37414114 ~ 37414819 (+) | False | G16998 |
| AMCG00016946 | mRNA | upstream | 49459 | 35803148 ~ 35848748 (+) | True | AMCG00016946 |
| AMCG00016945 | mRNA | upstream | 113048 | 35775076 ~ 35785159 (+) | True | AMCG00016945 |
| AMCG00016943 | mRNA | upstream | 274557 | 35623350 ~ 35623650 (+) | True | AMCG00016943 |
| AMCG00016941 | mRNA | upstream | 343011 | 35553222 ~ 35555196 (+) | True | AMCG00016941 |
| AMCG00016935 | mRNA | upstream | 637727 | 35247507 ~ 35260480 (+) | True | AMCG00016935 |
| AMCG00016948 | mRNA | downstream | 203850 | 36102366 ~ 36202202 (+) | True | AMCG00016948 |
| AMCG00016947 | mRNA | downstream | 342873 | 36241389 ~ 36252215 (+) | True | AMCG00016947 |
| AMCG00016949 | mRNA | downstream | 400856 | 36299372 ~ 36301893 (+) | True | AMCG00016949 |
| AMCG00016950 | mRNA | downstream | 602533 | 36501049 ~ 36524631 (+) | True | AMCG00016950 |
| AMCG00016951 | mRNA | downstream | 635420 | 36533936 ~ 36559981 (+) | True | AMCG00016951 |
| TU20555 | other | upstream | 1797344 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU20550 | other | upstream | 1850487 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU20517 | other | upstream | 2225587 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
| TU20240 | other | upstream | 3040767 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20165 | other | upstream | 3394951 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU21320 | other | downstream | 2597535 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU21955 | other | downstream | 6492781 | 42391297 ~ 42397787 (+) | True | G17697 |
| TU22431 | other | downstream | 8227698 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
| TU22550 | other | downstream | 8756136 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU23388 | other | downstream | 13504203 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
