RNA id: TU21073


Basic Information

Item Value
RNA id TU21073
length 435
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G16992
representative False

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 37241759 ~ 37337110 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCAATGTACTaaatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcgcatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggtgAAAATgtcttgttgatgctagaggtcagaggagaatgggccgactgattcaagctgatagaagagcaactttgactgaaataaccact

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21067 lncRNA downstream 45681 37195762 ~ 37196078 (-) True G16988
TU21065 lncRNA downstream 67596 37173881 ~ 37174163 (-) True G16986
TU21058 lncRNA downstream 532404 36709151 ~ 36709355 (-) True G16979
TU21000 lncRNA downstream 889581 36351953 ~ 36352178 (-) True G16927
TU20963 lncRNA downstream 1329674 35842930 ~ 35912085 (-) True G16893
TU21108 lncRNA upstream 77004 37414114 ~ 37414810 (-) True G17021
TU21120 lncRNA upstream 478467 37815577 ~ 37816017 (-) True G17033
TU21126 lncRNA upstream 521214 37858324 ~ 37858524 (-) True G17039
TU21147 lncRNA upstream 538140 37875250 ~ 37968168 (-) True AMCG00016959
TU21193 lncRNA upstream 752569 38089679 ~ 38117255 (-) True G17094
AMCG00016954 mRNA downstream 539777 36682750 ~ 36701982 (-) True AMCG00016954
AMCG00016953 mRNA downstream 671748 36566281 ~ 36570011 (-) True AMCG00016953
AMCG00016952 mRNA downstream 962082 36252375 ~ 36279677 (-) True AMCG00016952
AMCG00016944 mRNA downstream 1516726 35724533 ~ 35725033 (-) True AMCG00016944
AMCG00016942 mRNA downstream 1756863 35457197 ~ 35484896 (-) True AMCG00016942
AMCG00016955 mRNA upstream 81317 37418427 ~ 37499161 (-) True AMCG00016955
AMCG00016957 mRNA upstream 198763 37535873 ~ 37569505 (-) True AMCG00016957
AMCG00016956 mRNA upstream 349905 37687015 ~ 37688235 (-) True AMCG00016956
AMCG00016959 mRNA upstream 717563 38054673 ~ 38058800 (-) False AMCG00016959
AMCG00016958 mRNA upstream 724963 38062073 ~ 38071943 (-) True AMCG00016958
TU20574 other downstream 3133818 34106690 ~ 34107941 (-) True G16563
TU20442 other downstream 3728180 33488725 ~ 33513579 (-) False AMCG00016891
TU20415 other downstream 3810674 33426488 ~ 33431085 (-) False AMCG00016889
TU20326 other downstream 4062876 33176076 ~ 33178883 (-) True G16356
TU20192 other downstream 4742864 32497507 ~ 32498895 (-) False AMCG00016859
TU21119 other upstream 421047 37758157 ~ 37758471 (-) True G17032
TU21144 other upstream 690373 38027483 ~ 38058939 (-) False AMCG00016959
TU21143 other upstream 717555 38054665 ~ 38058939 (-) False AMCG00016959
TU21619 other upstream 3879541 41216651 ~ 41217231 (-) True G17421
TU22128 other upstream 5471601 42808711 ~ 42864616 (-) True G17842

Expression Profile