Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU21193 |
| length | 1210 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G17094 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 38089679 ~ 38117255 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0033692 | cellular polysaccharide biosynthetic process | biological_process |
| GO:0009103 | lipopolysaccharide biosynthetic process | biological_process |
| GO:0034637 | cellular carbohydrate biosynthetic process | biological_process |
| GO:0008653 | lipopolysaccharide metabolic process | biological_process |
| GO:0000271 | polysaccharide biosynthetic process | biological_process |
| GO:0016051 | carbohydrate biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU21147 | lncRNA | downstream | 121511 | 37875250 ~ 37968168 (-) | True | AMCG00016959 |
| TU21126 | lncRNA | downstream | 231155 | 37858324 ~ 37858524 (-) | True | G17039 |
| TU21120 | lncRNA | downstream | 273662 | 37815577 ~ 37816017 (-) | True | G17033 |
| TU21108 | lncRNA | downstream | 674869 | 37414114 ~ 37414810 (-) | True | G17021 |
| TU21075 | lncRNA | downstream | 833888 | 37241759 ~ 37255791 (-) | False | G16992 |
| TU21253 | lncRNA | upstream | 207995 | 38325250 ~ 38326037 (-) | True | G17140 |
| TU21261 | lncRNA | upstream | 222320 | 38339575 ~ 38339875 (-) | True | G17148 |
| TU21262 | lncRNA | upstream | 223128 | 38340383 ~ 38340835 (-) | True | G17149 |
| TU21281 | lncRNA | upstream | 268566 | 38385821 ~ 38386161 (-) | True | G17164 |
| TU21283 | lncRNA | upstream | 274415 | 38391670 ~ 38392072 (-) | True | G17166 |
| AMCG00016958 | mRNA | downstream | 17736 | 38062073 ~ 38071943 (-) | True | AMCG00016958 |
| AMCG00016959 | mRNA | downstream | 30879 | 38054673 ~ 38058800 (-) | False | AMCG00016959 |
| AMCG00016956 | mRNA | downstream | 401444 | 37687015 ~ 37688235 (-) | True | AMCG00016956 |
| AMCG00016957 | mRNA | downstream | 520174 | 37535873 ~ 37569505 (-) | True | AMCG00016957 |
| AMCG00016955 | mRNA | downstream | 590518 | 37418427 ~ 37499161 (-) | True | AMCG00016955 |
| AMCG00016963 | mRNA | upstream | 24506 | 38141761 ~ 38146133 (-) | True | AMCG00016963 |
| AMCG00016962 | mRNA | upstream | 32250 | 38149505 ~ 38163660 (-) | True | AMCG00016962 |
| AMCG00016961 | mRNA | upstream | 53897 | 38171152 ~ 38174324 (-) | True | AMCG00016961 |
| AMCG00016967 | mRNA | upstream | 65047 | 38182302 ~ 38219837 (-) | True | AMCG00016967 |
| AMCG00016968 | mRNA | upstream | 243279 | 38360534 ~ 38371250 (-) | True | AMCG00016968 |
| TU21144 | other | downstream | 30740 | 38027483 ~ 38058939 (-) | False | AMCG00016959 |
| TU21143 | other | downstream | 30740 | 38054665 ~ 38058939 (-) | False | AMCG00016959 |
| TU21119 | other | downstream | 331208 | 37758157 ~ 37758471 (-) | True | G17032 |
| TU20574 | other | downstream | 3981738 | 34106690 ~ 34107941 (-) | True | G16563 |
| TU20442 | other | downstream | 4576100 | 33488725 ~ 33513579 (-) | False | AMCG00016891 |
| TU21619 | other | upstream | 3099396 | 41216651 ~ 41217231 (-) | True | G17421 |
| TU22128 | other | upstream | 4691456 | 42808711 ~ 42864616 (-) | True | G17842 |
| TU23267 | other | upstream | 10371872 | 48489127 ~ 48494349 (-) | True | AMCG00017158 |
| TU23976 | other | upstream | 13313600 | 51430855 ~ 51435068 (-) | False | AMCG00017234 |
| TU23984 | other | upstream | 13328332 | 51445587 ~ 51449786 (-) | True | G19335 |
