Item | Value |
---|---|
RNA id | TU21282 |
length | 396 |
lncRNA type | inter_gene |
GC content | 0.33 |
exon number | 1 |
gene id | G17165 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030122.1 |
NCBI id | CM030122.1 |
chromosome length | 54868152 |
location | 38391677 ~ 38392072 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0043603 | cellular amide metabolic process | biological_process |
GO:0043604 | amide biosynthetic process | biological_process |
GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
GO:0043043 | peptide biosynthetic process | biological_process |
GO:0006412 | translation | biological_process |
GO:0010467 | gene expression | biological_process |
GO:0006518 | peptide metabolic process | biological_process |
id | description |
---|---|
ko03010 | Ribosome |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU21183 | lncRNA | upstream | 255837 | 38135173 ~ 38135840 (+) | True | G17089 |
TU21167 | lncRNA | upstream | 274422 | 38089801 ~ 38117255 (+) | True | G17073 |
TU21157 | lncRNA | upstream | 298998 | 38062034 ~ 38092679 (+) | True | G17064 |
TU21131 | lncRNA | upstream | 405020 | 37948232 ~ 37986657 (+) | True | G17044 |
TU21093 | lncRNA | upstream | 936276 | 37455176 ~ 37455401 (+) | True | G17006 |
TU21343 | lncRNA | downstream | 143989 | 38536061 ~ 38536333 (+) | True | G17214 |
TU21350 | lncRNA | downstream | 233454 | 38625526 ~ 38626023 (+) | True | G17221 |
TU21363 | lncRNA | downstream | 362449 | 38754521 ~ 38805946 (+) | True | G17230 |
TU21428 | lncRNA | downstream | 687343 | 39079415 ~ 39079897 (+) | True | G17274 |
TU21437 | lncRNA | downstream | 859428 | 39251500 ~ 39254490 (+) | False | AMCG00016979 |
AMCG00016965 | mRNA | upstream | 40214 | 38337645 ~ 38351463 (+) | True | AMCG00016965 |
AMCG00016966 | mRNA | upstream | 55031 | 38321965 ~ 38336646 (+) | True | AMCG00016966 |
AMCG00016960 | mRNA | upstream | 304141 | 38085290 ~ 38087536 (+) | True | AMCG00016960 |
AMCG00016951 | mRNA | upstream | 1831696 | 36533936 ~ 36559981 (+) | True | AMCG00016951 |
AMCG00016950 | mRNA | upstream | 1867046 | 36501049 ~ 36524631 (+) | True | AMCG00016950 |
AMCG00016970 | mRNA | downstream | 3627 | 38395699 ~ 38399287 (+) | True | AMCG00016970 |
AMCG00016972 | mRNA | downstream | 8658 | 38400730 ~ 38415204 (+) | True | AMCG00016972 |
AMCG00016975 | mRNA | downstream | 56536 | 38448608 ~ 38454664 (+) | True | AMCG00016975 |
AMCG00016974 | mRNA | downstream | 76078 | 38468150 ~ 38471891 (+) | True | AMCG00016974 |
AMCG00016973 | mRNA | downstream | 87260 | 38479332 ~ 38492044 (+) | True | AMCG00016973 |
TU20555 | other | upstream | 4290814 | 34100315 ~ 34100863 (+) | True | G16550 |
TU20550 | other | upstream | 4343957 | 34047371 ~ 34047720 (+) | True | G16546 |
TU20517 | other | upstream | 4719057 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
TU20240 | other | upstream | 5534237 | 32856361 ~ 32857440 (+) | True | G16289 |
TU20165 | other | upstream | 5888421 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
TU21320 | other | downstream | 103979 | 38496051 ~ 38503632 (+) | True | G17193 |
TU21955 | other | downstream | 3999225 | 42391297 ~ 42397787 (+) | True | G17697 |
TU22431 | other | downstream | 5734142 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
TU22550 | other | downstream | 6262580 | 44654652 ~ 44656098 (+) | True | G18192 |
TU23388 | other | downstream | 11010647 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |