RNA id: TU22284


Basic Information

Item Value
RNA id TU22284
length 207
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G17969
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 43394293 ~ 43394499 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGCGCTCTTGGTCAGTTTGTGGGTTGGTGAGGGGGGTTAACAGCCACGTCTTTAGTGGATAACCGCGGTCTCCTGATGGGCAGTTGAATAattaaacagcaaaaacaataataaaaataaaattaaatagaaccataactttaaatgcatcactcACCAAGAAGCCACCCATCGCGCACCCTGCCAGCTTGGAGCCTCATCCCAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22213 lncRNA upstream 158257 43235820 ~ 43236036 (+) True G17909
TU22180 lncRNA upstream 281657 43053086 ~ 43112636 (+) True G17882
TU21821 lncRNA upstream 1415627 41976395 ~ 41978666 (+) True G17580
TU21741 lncRNA upstream 1651520 41742350 ~ 41742773 (+) True G17518
TU21735 lncRNA upstream 1677304 41713810 ~ 41716989 (+) True G17514
TU22306 lncRNA downstream 75571 43470070 ~ 43470846 (+) True G17988
TU22305 lncRNA downstream 105671 43500170 ~ 43500476 (+) True G17987
TU22414 lncRNA downstream 707527 44102026 ~ 44103399 (+) True G18077
TU22423 lncRNA downstream 722467 44116966 ~ 44201038 (+) True G18084
TU22469 lncRNA downstream 982494 44376993 ~ 44377228 (+) True G18125
AMCG00017065 mRNA upstream 9444 43371658 ~ 43384849 (+) True AMCG00017065
AMCG00017066 mRNA upstream 24910 43365827 ~ 43369383 (+) True AMCG00017066
AMCG00017055 mRNA upstream 74980 43317690 ~ 43319313 (+) True AMCG00017055
AMCG00017056 mRNA upstream 79342 43308695 ~ 43314951 (+) True AMCG00017056
AMCG00017054 mRNA upstream 269890 43118218 ~ 43124403 (+) True AMCG00017054
AMCG00017076 mRNA downstream 150155 43544654 ~ 43546804 (+) True AMCG00017076
AMCG00017073 mRNA downstream 293561 43688060 ~ 43731559 (+) True AMCG00017073
AMCG00017072 mRNA downstream 374359 43768858 ~ 43773452 (+) True AMCG00017072
AMCG00017071 mRNA downstream 386925 43781424 ~ 43795570 (+) True AMCG00017071
AMCG00017068 mRNA downstream 412465 43806964 ~ 43814318 (+) True AMCG00017068
TU21955 other upstream 996506 42391297 ~ 42397787 (+) True G17697
TU21320 other upstream 4890661 38496051 ~ 38503632 (+) True G17193
TU20555 other upstream 9293430 34100315 ~ 34100863 (+) True G16550
TU20550 other upstream 9346573 34047371 ~ 34047720 (+) True G16546
TU20517 other upstream 9721673 33668629 ~ 33672620 (+) True AMCG00016901
TU22431 other downstream 731715 44126214 ~ 44131602 (+) False AMCG00017078
TU22550 other downstream 1260153 44654652 ~ 44656098 (+) True G18192
TU23388 other downstream 6008220 49402719 ~ 49403634 (+) False AMCG00017173
TU23515 other downstream 6319025 49713524 ~ 49721471 (+) False AMCG00017183
TU23710 other downstream 7157381 50551880 ~ 50552985 (+) True G19113

Expression Profile