Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22699 |
| length | 500 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G18302 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 45243484 ~ 45243983 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22639 | lncRNA | upstream | 257403 | 44985796 ~ 44986081 (+) | True | G18255 |
| TU22623 | lncRNA | upstream | 290520 | 44949034 ~ 44952964 (+) | True | AMCG00017099 |
| TU22537 | lncRNA | upstream | 529320 | 44662389 ~ 44714164 (+) | True | G18186 |
| TU22557 | lncRNA | upstream | 571614 | 44671292 ~ 44671870 (+) | True | G18197 |
| TU22555 | lncRNA | upstream | 572606 | 44669423 ~ 44670878 (+) | True | G18196 |
| TU22717 | lncRNA | downstream | 282761 | 45526744 ~ 45527005 (+) | True | G18316 |
| TU22733 | lncRNA | downstream | 538214 | 45782197 ~ 45782467 (+) | True | G18330 |
| TU22781 | lncRNA | downstream | 775358 | 46019341 ~ 46021345 (+) | True | G18357 |
| TU22789 | lncRNA | downstream | 857083 | 46101066 ~ 46101623 (+) | True | G18363 |
| TU22791 | lncRNA | downstream | 861614 | 46105597 ~ 46106518 (+) | True | G18365 |
| AMCG00017104 | mRNA | upstream | 15808 | 45220114 ~ 45227676 (+) | True | AMCG00017104 |
| AMCG00017099 | mRNA | upstream | 281883 | 44949136 ~ 44961601 (+) | False | AMCG00017099 |
| AMCG00017103 | mRNA | upstream | 309235 | 44933056 ~ 44934249 (+) | True | AMCG00017103 |
| AMCG00017098 | mRNA | upstream | 319850 | 44902466 ~ 44923634 (+) | True | AMCG00017098 |
| AMCG00017097 | mRNA | upstream | 351614 | 44881865 ~ 44891870 (+) | True | AMCG00017097 |
| AMCG00017113 | mRNA | downstream | 699067 | 45943050 ~ 46096926 (+) | True | AMCG00017113 |
| AMCG00017112 | mRNA | downstream | 985066 | 46229049 ~ 46245266 (+) | True | AMCG00017112 |
| AMCG00017114 | mRNA | downstream | 1068911 | 46312894 ~ 46327713 (+) | True | AMCG00017114 |
| AMCG00017121 | mRNA | downstream | 1169419 | 46413402 ~ 46415356 (+) | True | AMCG00017121 |
| AMCG00017120 | mRNA | downstream | 1172414 | 46416397 ~ 46419842 (+) | True | AMCG00017120 |
| TU22550 | other | upstream | 587386 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU22431 | other | upstream | 1111882 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
| TU21955 | other | upstream | 2845697 | 42391297 ~ 42397787 (+) | True | G17697 |
| TU21320 | other | upstream | 6739852 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU20555 | other | upstream | 11142621 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU23388 | other | downstream | 4158736 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
| TU23515 | other | downstream | 4469541 | 49713524 ~ 49721471 (+) | False | AMCG00017183 |
| TU23710 | other | downstream | 5307897 | 50551880 ~ 50552985 (+) | True | G19113 |
| TU23712 | other | downstream | 5315467 | 50559450 ~ 50561788 (+) | False | G19114 |
| TU24289 | other | downstream | 7570270 | 52814253 ~ 52817098 (+) | False | AMCG00017280 |
