RNA id: TU23747


Basic Information

Item Value
RNA id TU23747
length 259
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G19141
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50622181 ~ 50622439 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

accaCCCACTGTCATCCGATAAACCAGCAAGCATTTGGCTGGACTAAATCCTTTTCTTTGAAGAACTAATAGAAGTGGAGATCTATGCACTGAGCTGTTTCAGATAGATGTTTTCAAATTCTAACAATAATTTGCTTCATCTTTCAAAGCCAATACAATTTACTGTGACTTAAAAGATGTCGTAGGGTTACAGTAGCACAGGTTCTTTTTTTAGGAGGGCTAAATTTACACTACGTGTCATCAGAAAGAATCTCCGCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU23734 lncRNA downstream 249 50531201 ~ 50621932 (-) True G19130
TU23741 lncRNA downstream 51458 50568350 ~ 50570723 (-) True G19137
TU23740 lncRNA downstream 59265 50561023 ~ 50562916 (-) True G19136
TU23670 lncRNA downstream 290444 50329178 ~ 50331737 (-) True G19081
TU23643 lncRNA downstream 351524 50270408 ~ 50270657 (-) True G19055
TU23757 lncRNA upstream 14876 50637315 ~ 50638771 (-) True G19150
TU23756 lncRNA upstream 15430 50637869 ~ 50638771 (-) False G19150
TU23886 lncRNA upstream 542919 51165358 ~ 51165675 (-) True G19259
TU23900 lncRNA upstream 578492 51200931 ~ 51212373 (-) False AMCG00017232
TU23960 lncRNA upstream 673392 51295831 ~ 51296743 (-) True G19316
AMCG00017214 mRNA downstream 29100 50572116 ~ 50593081 (-) True AMCG00017214
AMCG00017208 mRNA downstream 96178 50523558 ~ 50526003 (-) True AMCG00017208
AMCG00017203 mRNA downstream 166069 50447385 ~ 50456112 (-) True AMCG00017203
AMCG00017199 mRNA downstream 237612 50377265 ~ 50384569 (-) True AMCG00017199
AMCG00017200 mRNA downstream 270382 50331771 ~ 50351799 (-) True AMCG00017200
AMCG00017215 mRNA upstream 20971 50643410 ~ 50652954 (-) True AMCG00017215
AMCG00017213 mRNA upstream 33680 50656119 ~ 50663669 (-) True AMCG00017213
AMCG00017216 mRNA upstream 48149 50670588 ~ 50671364 (-) True AMCG00017216
AMCG00017220 mRNA upstream 53812 50676251 ~ 50679198 (-) True AMCG00017220
AMCG00017218 mRNA upstream 70161 50692600 ~ 50694191 (-) True AMCG00017218
TU23267 other downstream 2127832 48489127 ~ 48494349 (-) True AMCG00017158
TU22128 other downstream 7757565 42808711 ~ 42864616 (-) True G17842
TU21619 other downstream 9404950 41216651 ~ 41217231 (-) True G17421
TU21144 other downstream 12563242 38027483 ~ 38058939 (-) False AMCG00016959
TU23976 other upstream 808416 51430855 ~ 51435068 (-) False AMCG00017234
TU23984 other upstream 823148 51445587 ~ 51449786 (-) True G19335
TU23985 other upstream 823148 51445587 ~ 51449786 (-) False G19335
TU24132 other upstream 1233807 51856246 ~ 51860142 (-) False AMCG00017251
TU24337 other upstream 2236151 52858590 ~ 52866419 (-) False AMCG00017292

Expression Profile