RNA id: TU23759



Basic Information


Item Value
RNA id TU23759
length 216
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G19152
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50640587 ~ 50640802 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGAGACAGGCAGTTTTCGGGCAGCCCTTCTCTCGCCCGGTTTCGTTCTGTTTCGGGGgagctgctgtttgtttttcgtGTCCCCGGCGCTTTCGAGGGGAAGATGAGGGCTCTGTCGCCTTGGATCCGGGCTGTGAATGTCCTCTGTAGCCGGCAAGTGGGGCGGAAAACGCGGCTGTCACAGTGCGGGATGTGCGGGACCGCCGCTGACAGCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU23752 lncRNA upstream 8953 50631378 ~ 50631634 (+) True G19146
TU23711 lncRNA upstream 77309 50559450 ~ 50563278 (+) True G19114
TU23651 lncRNA upstream 288640 50351252 ~ 50351947 (+) True G19062
TU23650 lncRNA upstream 298437 50341417 ~ 50342150 (+) True G19061
TU23648 lncRNA upstream 306081 50333760 ~ 50334506 (+) True G19059
TU23810 lncRNA downstream 86938 50727740 ~ 50728151 (+) True G19195
TU23870 lncRNA downstream 496491 51137293 ~ 51138835 (+) True G19245
TU23904 lncRNA downstream 655030 51295832 ~ 51296718 (+) True G19275
TU23921 lncRNA downstream 699111 51339913 ~ 51340117 (+) True G19292
TU24023 lncRNA downstream 924487 51565289 ~ 51571994 (+) True G19366
AMCG00017210 mRNA upstream 1619 50632108 ~ 50638968 (+) True AMCG00017210
AMCG00017212 mRNA upstream 18640 50615239 ~ 50621947 (+) True AMCG00017212
AMCG00017207 mRNA upstream 102917 50526813 ~ 50537670 (+) True AMCG00017207
AMCG00017206 mRNA upstream 118045 50517042 ~ 50522542 (+) True AMCG00017206
AMCG00017205 mRNA upstream 127232 50501043 ~ 50513355 (+) True AMCG00017205
AMCG00017211 mRNA downstream 4310 50645112 ~ 50652585 (+) True AMCG00017211
AMCG00017209 mRNA downstream 23524 50664326 ~ 50672185 (+) True AMCG00017209
AMCG00017217 mRNA downstream 56044 50696846 ~ 50711492 (+) True AMCG00017217
AMCG00017225 mRNA downstream 320031 50960833 ~ 50972601 (+) True AMCG00017225
AMCG00017224 mRNA downstream 344457 50985259 ~ 50989853 (+) True AMCG00017224
TU23712 other upstream 78799 50559450 ~ 50561788 (+) False G19114
TU23710 other upstream 87602 50551880 ~ 50552985 (+) True G19113
TU23515 other upstream 919116 49713524 ~ 49721471 (+) False AMCG00017183
TU23388 other upstream 1236953 49402719 ~ 49403634 (+) False AMCG00017173
TU22550 other upstream 5984489 44654652 ~ 44656098 (+) True G18192
TU24289 other downstream 2173451 52814253 ~ 52817098 (+) False AMCG00017280
TU24309 other downstream 2180259 52821061 ~ 52834042 (+) True AMCG00017287
TU24421 other downstream 2695107 53335909 ~ 53339655 (+) True G19683
TU24512 other downstream 2862630 53503432 ~ 53536464 (+) True G19754
TU24604 other downstream 3149745 53790547 ~ 53792694 (+) True G19829

Expression Profile